Analysis of interatomic Contacts of Structural Units in PDB entry:
7XF2


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7XF2 entry

There are 2 chains in PDB entry 7XF2 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1SER 466
B
 MET 1SER 466
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 34 helices in PDB entry 7XF2. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
2 25Right-handed alpha
Helix 2
AA2
A
76 85Right-handed alpha
Helix 3
AA3
A
92 110Right-handed alpha
Helix 4
AA4
A
123 128Right-handed alpha
Helix 5
AA5
A
158 163Right-handed alpha
Helix 6
AA6
A
164 179Right-handed alpha
Helix 7
AA7
A
190 200Right-handed alpha
Helix 8
AA8
A
202 219Right-handed alpha
Helix 9
AA9
A
236 248Right-handed alpha
Helix 10
AB1
A
264 299Right-handed alpha
Helix 11
AB2
A
308 322Right-handed alpha
Helix 12
AB3
A
334 349Right-handed alpha
Helix 13
AB4
A
352 357Right-handed alpha
Helix 14
AB5
A
376 382Right-handed alpha
Helix 15
AB6
A
387 409Right-handed alpha
Helix 16
AB7
A
415 424Right-handed alpha
Helix 17
AB8
A
425 427Right-handed 310
Helix 18
AB9
A
428 466Right-handed alpha
Helix 19
AC1
B
2 24Right-handed alpha
Helix 20
AC2
B
82 110Right-handed alpha
Helix 21
AC3
B
123 127Right-handed alpha
Helix 22
AC4
B
158 164Right-handed alpha
Helix 23
AC5
B
164 180Right-handed alpha
Helix 24
AC6
B
184 188Right-handed 310
Helix 25
AC7
B
189 200Right-handed alpha
Helix 26
AC8
B
201 219Right-handed alpha
Helix 27
AC9
B
236 254Right-handed alpha
Helix 28
AD1
B
264 299Right-handed alpha
Helix 29
AD2
B
311 322Right-handed alpha
Helix 30
AD3
B
334 349Right-handed alpha
Helix 31
AD4
B
351 357Right-handed alpha
Helix 32
AD5
B
377 383Right-handed alpha
Helix 33
AD6
B
389 409Right-handed alpha
Helix 34
AD7
B
427 466Right-handed alpha
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There are 4 sheets in PDB entry 7XF2. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
131 133first strand
Strand 2
A
139 141anti-parallel
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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
147 148first strand
Strand 2
A
329 332parallel
Strand 3
A
300 302anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
132 133first strand
Strand 2
B
139 140anti-parallel
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There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
146 148first strand
Strand 2
B
328 331parallel
Strand 3
B
301 302anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il