Analysis of interatomic Contacts of Structural Units in PDB entry:
7XGT


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7XGT entry

There are 2 chains in PDB entry 7XGT (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 PRO 28PHE 302
B
 PRO 28PHE 302
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 28 helices in PDB entry 7XGT. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
51 53Right-handed 310
Helix 2
AA2
A
63 67Right-handed 310
Helix 3
AA3
A
78 83Right-handed alpha
Helix 4
AA4
A
84 95Right-handed alpha
Helix 5
AA5
A
108 124Right-handed alpha
Helix 6
AA6
A
173 176Right-handed 310
Helix 7
AA7
A
185 190Right-handed alpha
Helix 8
AA8
A
209 214Right-handed 310
Helix 9
AA9
A
215 219Right-handed 310
Helix 10
AB1
A
239 246Right-handed alpha
Helix 11
AB2
A
250 256Right-handed alpha
Helix 12
AB3
A
257 261Right-handed 310
Helix 13
AB4
A
276 286Right-handed alpha
Helix 14
AB5
A
288 293Right-handed alpha
Helix 15
AB6
B
51 53Right-handed 310
Helix 16
AB7
B
63 67Right-handed 310
Helix 17
AB8
B
78 83Right-handed alpha
Helix 18
AB9
B
84 95Right-handed alpha
Helix 19
AC1
B
108 124Right-handed alpha
Helix 20
AC2
B
173 176Right-handed 310
Helix 21
AC3
B
179 190Right-handed alpha
Helix 22
AC4
B
209 217Right-handed 310
Helix 23
AC5
B
218 224Right-handed alpha
Helix 24
AC6
B
239 246Right-handed alpha
Helix 25
AC7
B
250 257Right-handed alpha
Helix 26
AC8
B
258 261Right-handed 310
Helix 27
AC9
B
276 286Right-handed alpha
Helix 28
AD1
B
288 293Right-handed alpha
Back to top of page

There are 6 sheets in PDB entry 7XGT. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6,

There are 7 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
29 31first strand
Strand 2
A
34 42anti-parallel
Strand 3
A
45 50anti-parallel
Strand 4
A
55 57anti-parallel
Strand 5
A
71 73parallel
Strand 6
A
101 105parallel
Strand 7
A
130 134parallel
Back to list of sheets
Back to top of page

There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
29 31first strand
Strand 2
A
34 42anti-parallel
Strand 3
A
271 272parallel
Back to list of sheets
Back to top of page

There are 7 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
139 143first strand
Strand 2
A
146 152anti-parallel
Strand 3
A
160 171anti-parallel
Strand 4
A
194 204anti-parallel
Strand 5
A
226 230parallel
Strand 6
A
265 269parallel
Strand 7
A
295 297parallel
Back to list of sheets
Back to top of page

There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
30 31first strand
Strand 2
B
34 35anti-parallel
Back to list of sheets
Back to top of page

There are 6 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
37 41first strand
Strand 2
B
45 50anti-parallel
Strand 3
B
55 57anti-parallel
Strand 4
B
71 73parallel
Strand 5
B
101 105parallel
Strand 6
B
130 134parallel
Back to list of sheets
Back to top of page

There are 7 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
139 143first strand
Strand 2
B
146 152anti-parallel
Strand 3
B
160 171anti-parallel
Strand 4
B
194 204anti-parallel
Strand 5
B
226 230parallel
Strand 6
B
265 269parallel
Strand 7
B
295 297parallel
Back to list of sheets
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il