Analysis of interatomic Contacts of Structural Units in PDB entry:
7XHA


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7XHA entry

There are 4 chains in PDB entry 7XHA (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ARG 14ALA 778
Y
 PHE 2LYS 430
E
 GLN 2PHE 59
B
 ALA 2GLY 55
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 51 helices in PDB entry 7XHA. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
15 29Right-handed alpha
Helix 2
AA2
A
30 33Right-handed 310
Helix 3
AA3
A
37 53Right-handed alpha
Helix 4
AA4
A
58 60Right-handed 310
Helix 5
AA5
A
61 78Right-handed alpha
Helix 6
AA6
A
82 94Right-handed alpha
Helix 7
AA7
A
107 118Right-handed alpha
Helix 8
AA8
A
130 149Right-handed alpha
Helix 9
AA9
A
160 169Right-handed alpha
Helix 10
AB1
A
177 188Right-handed alpha
Helix 11
AB2
A
208 213Right-handed alpha
Helix 12
AB3
A
231 242Right-handed alpha
Helix 13
AB4
A
262 273Right-handed alpha
Helix 14
AB5
A
283 299Right-handed alpha
Helix 15
AB6
A
301 305Right-handed alpha
Helix 16
AB7
A
333 341Right-handed alpha
Helix 17
AB8
A
356 362Right-handed alpha
Helix 18
AB9
A
377 385Right-handed alpha
Helix 19
AC1
A
410 427Right-handed alpha
Helix 20
AC2
A
439 451Right-handed alpha
Helix 21
AC3
A
464 473Right-handed alpha
Helix 22
AC4
A
515 527Right-handed alpha
Helix 23
AC5
A
543 550Right-handed alpha
Helix 24
AC6
A
551 558Right-handed alpha
Helix 25
AC7
A
559 562Right-handed 310
Helix 26
AC8
A
573 619Right-handed alpha
Helix 27
AC9
A
623 643Right-handed alpha
Helix 28
AD1
A
653 665Right-handed alpha
Helix 29
AD2
A
680 704Right-handed alpha
Helix 30
AD3
A
706 737Right-handed alpha
Helix 31
AD4
A
738 745Right-handed 310
Helix 32
AD5
A
747 778Right-handed alpha
Helix 33
AD6
Y
3 9Right-handed alpha
Helix 34
AD7
Y
11 33Right-handed alpha
Helix 35
AD8
Y
42 47Right-handed alpha
Helix 36
AD9
Y
74 88Right-handed alpha
Helix 37
AE1
Y
92 101Right-handed alpha
Helix 38
AE2
Y
105 136Right-handed alpha
Helix 39
AE3
Y
146 174Right-handed alpha
Helix 40
AE4
Y
177 188Right-handed alpha
Helix 41
AE5
Y
190 202Right-handed alpha
Helix 42
AE6
Y
216 236Right-handed alpha
Helix 43
AE7
Y
271 291Right-handed alpha
Helix 44
AE8
Y
294 304Right-handed alpha
Helix 45
AE9
Y
308 331Right-handed alpha
Helix 46
AF1
Y
332 344Right-handed alpha
Helix 47
AF2
Y
354 390Right-handed alpha
Helix 48
AF3
Y
399 422Right-handed alpha
Helix 49
AF4
E
3 15Right-handed alpha
Helix 50
AF5
E
22 58Right-handed alpha
Helix 51
AF6
B
3 20Right-handed alpha
Back to top of page

There are 7 sheets in PDB entry 7XHA. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
98 99first strand
Strand 2
A
390 391parallel
Back to list of sheets
Back to top of page

There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
152 154first strand
Strand 2
A
172 176parallel
Strand 3
A
124 128parallel
Strand 4
A
203 207parallel
Strand 5
A
366 370parallel
Back to list of sheets
Back to top of page

There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
327 329first strand
Strand 2
B
50 53anti-parallel
Strand 3
A
221 225parallel
Strand 4
A
350 355anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
250 252first strand
Strand 2
A
259 261anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
306 309first strand
Strand 2
A
312 315anti-parallel
Back to list of sheets
Back to top of page

There are 6 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
401 402first strand
Strand 2
A
534 537parallel
Strand 3
A
506 509parallel
Strand 4
A
432 435parallel
Strand 5
A
480 483parallel
Strand 6
A
457 459parallel
Back to list of sheets
Back to top of page

There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
Y
238 241first strand
Strand 2
Y
262 265anti-parallel
Back to list of sheets
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il