Analysis of interatomic Contacts of Structural Units in PDB entry:
7XHV


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7XHV entry

There are 4 chains in PDB entry 7XHV (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASP 85VAL 345
B
 ARG 3PRO 198
C
 G 1 T 16
D
 C 1 T 16
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 16 helices in PDB entry 7XHV. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
85 114Right-handed alpha
Helix 2
AA2
A
127 140Right-handed alpha
Helix 3
AA3
A
160 172Right-handed alpha
Helix 4
AA4
A
192 198Right-handed alpha
Helix 5
AA5
A
200 204Right-handed 310
Helix 6
AA6
A
209 213Right-handed 310
Helix 7
AA7
A
214 226Right-handed alpha
Helix 8
AA8
B
8 27Right-handed alpha
Helix 9
AA9
B
30 34Right-handed 310
Helix 10
AB1
B
38 50Right-handed alpha
Helix 11
AB2
B
53 58Right-handed alpha
Helix 12
AB3
B
70 81Right-handed alpha
Helix 13
AB4
B
100 105Right-handed alpha
Helix 14
AB5
B
108 113Right-handed alpha
Helix 15
AB6
B
118 123Right-handed alpha
Helix 16
AB7
B
124 137Right-handed alpha
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There are 3 sheets in PDB entry 7XHV. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
186 189first strand
Strand 2
A
174 180anti-parallel
Strand 3
A
336 343anti-parallel
Strand 4
A
304 313anti-parallel
Strand 5
A
260 267anti-parallel
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There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
94 97first strand
Strand 2
B
84 89anti-parallel
Strand 3
B
192 195anti-parallel
Strand 4
B
167 172anti-parallel
Strand 5
B
145 150anti-parallel
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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
94 97first strand
Strand 2
B
84 89anti-parallel
Strand 3
B
188 189anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il