Analysis of interatomic Contacts of Structural Units in PDB entry:
7XID

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 7XID entry

There are 5 chains in PDB entry 7XID (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	ALA 27	ASP 1146
B	ALA 27	ASP 1146
C	ALA 27	ASP 1146
D	SER 19	ASP 615
E	SER 19	ASP 615

There are131 helices in PDB entry 7XID. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	294	304	Right-handed alpha
Helix 2	AA2	A	338	343	Right-handed alpha
Helix 3	AA3	A	349	353	Right-handed 310
Helix 4	AA4	A	364	368	Right-handed 310
Helix 5	AA5	A	386	390	Right-handed 310
Helix 6	AA6	A	405	410	Right-handed 310
Helix 7	AA7	A	416	422	Right-handed alpha
Helix 8	AA8	A	438	443	Right-handed alpha
Helix 9	AA9	A	502	505	Right-handed 310
Helix 10	AB1	A	737	743	Right-handed alpha
Helix 11	AB2	A	746	754	Right-handed alpha
Helix 12	AB3	A	755	757	Right-handed 310
Helix 13	AB4	A	758	783	Right-handed alpha
Helix 14	AB5	A	811	815	Right-handed 310
Helix 15	AB6	A	816	826	Right-handed alpha
Helix 16	AB7	A	866	885	Right-handed alpha
Helix 17	AB8	A	886	890	Right-handed 310
Helix 18	AB9	A	897	908	Right-handed alpha
Helix 19	AC1	A	912	918	Right-handed alpha
Helix 20	AC2	A	919	932	Right-handed alpha
Helix 21	AC3	A	933	940	Right-handed alpha
Helix 22	AC4	A	945	964	Right-handed alpha
Helix 23	AC5	A	965	968	Right-handed 310
Helix 24	AC6	A	976	981	Right-handed alpha
Helix 25	AC7	A	985	1033	Right-handed alpha
Helix 26	AC8	A	1140	1146	Right-handed alpha
Helix 27	AC9	B	294	304	Right-handed alpha
Helix 28	AD1	B	338	343	Right-handed alpha
Helix 29	AD2	B	349	353	Right-handed 310
Helix 30	AD3	B	383	388	Right-handed alpha
Helix 31	AD4	B	404	410	Right-handed 310
Helix 32	AD5	B	417	422	Right-handed alpha
Helix 33	AD6	B	502	506	Right-handed 310
Helix 34	AD7	B	737	743	Right-handed alpha
Helix 35	AD8	B	747	754	Right-handed alpha
Helix 36	AD9	B	755	757	Right-handed 310
Helix 37	AE1	B	758	783	Right-handed alpha
Helix 38	AE2	B	816	823	Right-handed alpha
Helix 39	AE3	B	866	885	Right-handed alpha
Helix 40	AE4	B	886	890	Right-handed 310
Helix 41	AE5	B	897	909	Right-handed alpha
Helix 42	AE6	B	913	918	Right-handed alpha
Helix 43	AE7	B	919	939	Right-handed alpha
Helix 44	AE8	B	945	965	Right-handed alpha
Helix 45	AE9	B	978	983	Right-handed alpha
Helix 46	AF1	B	985	1033	Right-handed alpha
Helix 47	AF2	B	1140	1145	Right-handed alpha
Helix 48	AF3	C	294	304	Right-handed alpha
Helix 49	AF4	C	338	343	Right-handed alpha
Helix 50	AF5	C	349	353	Right-handed 310
Helix 51	AF6	C	383	388	Right-handed alpha
Helix 52	AF7	C	404	410	Right-handed 310
Helix 53	AF8	C	417	422	Right-handed alpha
Helix 54	AF9	C	502	506	Right-handed 310
Helix 55	AG1	C	737	743	Right-handed alpha
Helix 56	AG2	C	746	753	Right-handed alpha
Helix 57	AG3	C	754	756	Right-handed 310
Helix 58	AG4	C	758	783	Right-handed alpha
Helix 59	AG5	C	816	826	Right-handed alpha
Helix 60	AG6	C	866	884	Right-handed alpha
Helix 61	AG7	C	897	908	Right-handed alpha
Helix 62	AG8	C	913	918	Right-handed alpha
Helix 63	AG9	C	919	933	Right-handed alpha
Helix 64	AH1	C	933	939	Right-handed alpha
Helix 65	AH2	C	945	965	Right-handed alpha
Helix 66	AH3	C	966	968	Right-handed 310
Helix 67	AH4	C	976	981	Right-handed alpha
Helix 68	AH5	C	985	1033	Right-handed alpha
Helix 69	AH6	C	1140	1146	Right-handed alpha
Helix 70	AH7	D	21	53	Right-handed alpha
Helix 71	AH8	D	55	81	Right-handed alpha
Helix 72	AH9	D	82	83	Right-handed 310
Helix 73	AI1	D	84	88	Right-handed 310
Helix 74	AI2	D	90	101	Right-handed alpha
Helix 75	AI3	D	109	129	Right-handed alpha
Helix 76	AI4	D	148	154	Right-handed alpha
Helix 77	AI5	D	157	193	Right-handed alpha
Helix 78	AI6	D	198	205	Right-handed alpha
Helix 79	AI7	D	206	208	Right-handed 310
Helix 80	AI8	D	221	231	Right-handed alpha
Helix 81	AI9	D	233	247	Right-handed alpha
Helix 82	AJ1	D	275	277	Right-handed 310
Helix 83	AJ2	D	278	283	Right-handed alpha
Helix 84	AJ3	D	293	300	Right-handed alpha
Helix 85	AJ4	D	303	319	Right-handed alpha
Helix 86	AJ5	D	324	331	Right-handed alpha
Helix 87	AJ6	D	365	385	Right-handed alpha
Helix 88	AJ7	D	389	393	Right-handed 310
Helix 89	AJ8	D	399	413	Right-handed alpha
Helix 90	AJ9	D	414	421	Right-handed alpha
Helix 91	AK1	D	431	466	Right-handed alpha
Helix 92	AK2	D	472	482	Right-handed alpha
Helix 93	AK3	D	498	502	Right-handed 310
Helix 94	AK4	D	503	508	Right-handed alpha
Helix 95	AK5	D	513	529	Right-handed alpha
Helix 96	AK6	D	538	542	Right-handed 310
Helix 97	AK7	D	547	559	Right-handed alpha
Helix 98	AK8	D	565	572	Right-handed alpha
Helix 99	AK9	D	581	588	Right-handed alpha
Helix 100	AL1	D	588	599	Right-handed alpha
Helix 101	AL2	D	600	602	Right-handed 310
Helix 102	AL3	E	21	53	Right-handed alpha
Helix 103	AL4	E	55	81	Right-handed alpha
Helix 104	AL5	E	90	101	Right-handed alpha
Helix 105	AL6	E	109	129	Right-handed alpha
Helix 106	AL7	E	148	154	Right-handed alpha
Helix 107	AL8	E	157	193	Right-handed alpha
Helix 108	AL9	E	198	205	Right-handed alpha
Helix 109	AM1	E	206	208	Right-handed 310
Helix 110	AM2	E	221	231	Right-handed alpha
Helix 111	AM3	E	233	247	Right-handed alpha
Helix 112	AM4	E	275	277	Right-handed 310
Helix 113	AM5	E	278	283	Right-handed alpha
Helix 114	AM6	E	293	300	Right-handed alpha
Helix 115	AM7	E	303	319	Right-handed alpha
Helix 116	AM8	E	324	331	Right-handed alpha
Helix 117	AM9	E	365	385	Right-handed alpha
Helix 118	AN1	E	389	393	Right-handed 310
Helix 119	AN2	E	399	413	Right-handed alpha
Helix 120	AN3	E	414	421	Right-handed alpha
Helix 121	AN4	E	431	466	Right-handed alpha
Helix 122	AN5	E	472	482	Right-handed alpha
Helix 123	AN6	E	498	502	Right-handed 310
Helix 124	AN7	E	503	508	Right-handed alpha
Helix 125	AN8	E	513	529	Right-handed alpha
Helix 126	AN9	E	538	542	Right-handed 310
Helix 127	AO1	E	547	559	Right-handed alpha
Helix 128	AO2	E	565	572	Right-handed alpha
Helix 129	AO3	E	581	588	Right-handed alpha
Helix 130	AO4	E	588	599	Right-handed alpha
Helix 131	AO5	E	600	602	Right-handed 310

There are 47 sheets in PDB entry 7XID. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6, AC7, AC8, AC9, AD1, AD2, AD3, AD4, AD5, AD6, AD7, AD8, AD9, AE1, AE2, AE3, AE4, AE5, AE6, AE7, AE8, AE9, AF1, AF2,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	28	30	first strand
Strand 2	A	61	65	anti-parallel
Strand 3	A	265	267	anti-parallel

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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	49	55	first strand
Strand 2	A	271	279	anti-parallel
Strand 3	A	285	290	anti-parallel

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There are 6 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	84	85	first strand
Strand 2	A	237	242	anti-parallel
Strand 3	A	101	107	anti-parallel
Strand 4	A	116	121	anti-parallel
Strand 5	A	126	135	anti-parallel
Strand 6	A	160	169	anti-parallel

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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	90	92	first strand
Strand 2	A	188	197	anti-parallel
Strand 3	A	200	209	anti-parallel
Strand 4	A	224	230	anti-parallel

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There are 5 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	311	319	first strand
Strand 2	A	592	599	anti-parallel
Strand 3	A	609	613	anti-parallel
Strand 4	A	648	651	anti-parallel
Strand 5	A	642	645	anti-parallel

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There are 6 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	323	328	first strand
Strand 2	A	538	543	parallel
Strand 3	A	546	554	anti-parallel
Strand 4	A	584	588	anti-parallel
Strand 5	A	573	577	anti-parallel
Strand 6	A	565	567	anti-parallel

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There are 5 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	354	358	first strand
Strand 2	A	394	403	anti-parallel
Strand 3	A	507	516	anti-parallel
Strand 4	A	431	437	anti-parallel
Strand 5	A	376	379	anti-parallel

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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	361	362	first strand
Strand 2	A	524	525	parallel

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There are 4 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	654	655	first strand
Strand 2	A	693	696	parallel
Strand 3	A	670	673	anti-parallel
Strand 4	A	664	667	anti-parallel

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There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	702	703	first strand
Strand 2	B	788	789	parallel

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There are 3 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	711	728	first strand
Strand 2	A	1059	1078	anti-parallel
Strand 3	A	1047	1056	anti-parallel

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There are 5 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	711	728	first strand
Strand 2	A	1059	1078	anti-parallel
Strand 3	A	1094	1097	anti-parallel
Strand 4	A	1102	1105	anti-parallel
Strand 5	A	1113	1114	anti-parallel

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There are 2 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	733	736	first strand
Strand 2	A	858	861	anti-parallel

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There are 2 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	788	790	first strand
Strand 2	C	702	704	parallel

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There are 4 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	1120	1125	first strand
Strand 2	A	1086	1090	anti-parallel
Strand 3	A	1081	1083	anti-parallel
Strand 4	A	1133	1134	parallel

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There are 7 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	28	30	first strand
Strand 2	B	61	65	anti-parallel
Strand 3	B	265	268	anti-parallel
Strand 4	B	90	94	anti-parallel
Strand 5	B	188	197	anti-parallel
Strand 6	B	200	209	anti-parallel
Strand 7	B	224	230	anti-parallel

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There are 3 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	49	55	first strand
Strand 2	B	271	279	anti-parallel
Strand 3	B	285	290	anti-parallel

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There are 6 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	84	85	first strand
Strand 2	B	237	242	anti-parallel
Strand 3	B	101	107	anti-parallel
Strand 4	B	116	121	anti-parallel
Strand 5	B	126	135	anti-parallel
Strand 6	B	160	168	anti-parallel

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There are 5 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	311	319	first strand
Strand 2	B	592	599	anti-parallel
Strand 3	B	609	613	anti-parallel
Strand 4	B	648	651	anti-parallel
Strand 5	B	642	645	anti-parallel

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There are 6 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	323	328	first strand
Strand 2	B	538	543	parallel
Strand 3	B	546	554	anti-parallel
Strand 4	B	584	588	anti-parallel
Strand 5	B	573	577	anti-parallel
Strand 6	B	565	567	anti-parallel

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There are 5 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	354	358	first strand
Strand 2	B	394	402	anti-parallel
Strand 3	B	508	516	anti-parallel
Strand 4	B	432	437	anti-parallel
Strand 5	B	376	379	anti-parallel

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There are 2 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	452	454	first strand
Strand 2	B	492	494	anti-parallel

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There are 4 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	654	660	first strand
Strand 2	B	693	697	parallel
Strand 3	B	670	673	anti-parallel
Strand 4	B	664	667	anti-parallel

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There are 2 strands in AC6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	702	704	first strand
Strand 2	C	788	790	parallel

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There are 3 strands in AC7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	711	728	first strand
Strand 2	B	1059	1078	anti-parallel
Strand 3	B	1047	1056	anti-parallel

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There are 4 strands in AC8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	711	728	first strand
Strand 2	B	1059	1078	anti-parallel
Strand 3	B	1094	1097	anti-parallel
Strand 4	B	1102	1105	anti-parallel

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There are 2 strands in AC9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	733	736	first strand
Strand 2	B	858	861	anti-parallel

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There are 4 strands in AD1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	1120	1125	first strand
Strand 2	B	1086	1090	anti-parallel
Strand 3	B	1081	1083	anti-parallel
Strand 4	B	1133	1134	parallel

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There are 3 strands in AD2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	28	30	first strand
Strand 2	C	61	65	anti-parallel
Strand 3	C	265	267	anti-parallel

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There are 3 strands in AD3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	49	55	first strand
Strand 2	C	271	279	anti-parallel
Strand 3	C	285	290	anti-parallel

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There are 6 strands in AD4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	84	85	first strand
Strand 2	C	237	242	anti-parallel
Strand 3	C	101	107	anti-parallel
Strand 4	C	115	121	anti-parallel
Strand 5	C	126	135	anti-parallel
Strand 6	C	160	168	anti-parallel

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There are 4 strands in AD5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	90	92	first strand
Strand 2	C	188	197	anti-parallel
Strand 3	C	200	209	anti-parallel
Strand 4	C	224	225	anti-parallel

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There are 5 strands in AD6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	311	319	first strand
Strand 2	C	592	599	anti-parallel
Strand 3	C	609	613	anti-parallel
Strand 4	C	648	651	anti-parallel
Strand 5	C	642	645	anti-parallel

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There are 6 strands in AD7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	323	328	first strand
Strand 2	C	538	543	parallel
Strand 3	C	546	554	anti-parallel
Strand 4	C	584	588	anti-parallel
Strand 5	C	573	577	anti-parallel
Strand 6	C	565	567	anti-parallel

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There are 5 strands in AD8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	354	358	first strand
Strand 2	C	394	402	anti-parallel
Strand 3	C	508	516	anti-parallel
Strand 4	C	432	437	anti-parallel
Strand 5	C	376	379	anti-parallel

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There are 2 strands in AD9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	452	454	first strand
Strand 2	C	492	494	anti-parallel

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There are 4 strands in AE1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	654	655	first strand
Strand 2	C	693	696	parallel
Strand 3	C	670	673	anti-parallel
Strand 4	C	664	667	anti-parallel

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There are 3 strands in AE2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	711	728	first strand
Strand 2	C	1059	1077	anti-parallel
Strand 3	C	1047	1056	anti-parallel

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There are 4 strands in AE3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	711	728	first strand
Strand 2	C	1059	1077	anti-parallel
Strand 3	C	1094	1097	anti-parallel
Strand 4	C	1102	1105	anti-parallel

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There are 2 strands in AE4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	733	735	first strand
Strand 2	C	859	861	anti-parallel

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There are 4 strands in AE5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	1120	1122	first strand
Strand 2	C	1086	1090	anti-parallel
Strand 3	C	1081	1083	anti-parallel
Strand 4	C	1133	1134	parallel

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There are 2 strands in AE6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	131	133	first strand
Strand 2	D	141	143	anti-parallel

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There are 2 strands in AE7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	262	263	first strand
Strand 2	D	487	488	parallel

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There are 2 strands in AE8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	347	352	first strand
Strand 2	D	355	359	anti-parallel

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There are 2 strands in AE9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	131	133	first strand
Strand 2	E	141	143	anti-parallel

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There are 2 strands in AF1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	262	263	first strand
Strand 2	E	487	488	parallel

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There are 2 strands in AF2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	347	352	first strand
Strand 2	E	355	359	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 7XID

Analysis of interatomic Contacts of Structural Units in PDB entry:
7XID