Analysis of interatomic Contacts of Structural Units in PDB entry:
7XJH

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 7XJH entry

There are 5 chains in PDB entry 7XJH (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	THR 9	LEU 384
B	GLN 1	ASN 340
G	ALA 10	PHE 61
N	GLN 1	SER 128
R	ALA 36	LEU 360

There are 33 helices in PDB entry 7XJH. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	9	38	Right-handed alpha
Helix 2	AA2	A	52	57	Right-handed alpha
Helix 3	AA3	A	235	239	Right-handed 310
Helix 4	AA4	A	252	255	Right-handed 310
Helix 5	AA5	A	256	268	Right-handed alpha
Helix 6	AA6	A	283	294	Right-handed alpha
Helix 7	AA7	A	297	301	Right-handed 310
Helix 8	AA8	A	302	308	Right-handed 310
Helix 9	AA9	A	321	341	Right-handed alpha
Helix 10	AB1	A	360	381	Right-handed alpha
Helix 11	AB2	B	2	25	Right-handed alpha
Helix 12	AB3	B	29	34	Right-handed alpha
Helix 13	AB4	B	35	37	Right-handed 310
Helix 14	AB5	G	11	23	Right-handed alpha
Helix 15	AB6	G	29	45	Right-handed alpha
Helix 16	AB7	G	46	48	Right-handed 310
Helix 17	AB8	N	28	32	Right-handed 310
Helix 18	AB9	N	87	91	Right-handed 310
Helix 19	AC1	R	37	64	Right-handed alpha
Helix 20	AC2	R	65	69	Right-handed 310
Helix 21	AC3	R	70	90	Right-handed alpha
Helix 22	AC4	R	90	100	Right-handed alpha
Helix 23	AC5	R	106	141	Right-handed alpha
Helix 24	AC6	R	144	149	Right-handed alpha
Helix 25	AC7	R	150	170	Right-handed alpha
Helix 26	AC8	R	170	175	Right-handed alpha
Helix 27	AC9	R	188	192	Right-handed 310
Helix 28	AD1	R	201	213	Right-handed alpha
Helix 29	AD2	R	213	243	Right-handed alpha
Helix 30	AD3	R	288	318	Right-handed alpha
Helix 31	AD4	R	324	342	Right-handed alpha
Helix 32	AD5	R	343	345	Right-handed 310
Helix 33	AD6	R	349	360	Right-handed alpha

There are 10 sheets in PDB entry 7XJH. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	207	214	first strand
Strand 2	A	217	224	anti-parallel
Strand 3	A	40	46	parallel
Strand 4	A	243	248	parallel
Strand 5	A	276	281	parallel
Strand 6	A	349	353	parallel

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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	47	51	first strand
Strand 2	B	336	339	anti-parallel
Strand 3	B	327	331	anti-parallel
Strand 4	B	315	320	anti-parallel

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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	58	63	first strand
Strand 2	B	69	74	anti-parallel
Strand 3	B	78	83	anti-parallel
Strand 4	B	89	94	anti-parallel

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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	100	105	first strand
Strand 2	B	111	116	anti-parallel
Strand 3	B	121	125	anti-parallel
Strand 4	B	134	139	anti-parallel

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There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	146	150	first strand
Strand 2	B	158	161	anti-parallel
Strand 3	B	165	170	anti-parallel
Strand 4	B	175	181	anti-parallel

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There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	187	192	first strand
Strand 2	B	198	203	anti-parallel
Strand 3	B	208	212	anti-parallel
Strand 4	B	218	222	anti-parallel

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There are 4 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	229	234	first strand
Strand 2	B	240	245	anti-parallel
Strand 3	B	250	254	anti-parallel
Strand 4	B	260	264	anti-parallel

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There are 4 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	273	278	first strand
Strand 2	B	284	289	anti-parallel
Strand 3	B	295	298	anti-parallel
Strand 4	B	304	307	anti-parallel

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There are 4 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	N	3	7	first strand
Strand 2	N	18	25	anti-parallel
Strand 3	N	78	83	anti-parallel
Strand 4	N	68	73	anti-parallel

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There are 6 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	N	11	12	first strand
Strand 2	N	122	126	parallel
Strand 3	N	92	95	anti-parallel
Strand 4	N	34	39	anti-parallel
Strand 5	N	45	51	anti-parallel
Strand 6	N	58	60	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 7XJH

Analysis of interatomic Contacts of Structural Units in PDB entry:
7XJH