Analysis of interatomic Contacts of Structural Units in PDB entry:
7XJP


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7XJP entry

There are 2 chains in PDB entry 7XJP (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ALA 2TYR 615
B
 SER 3LYS 535
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 54 helices in PDB entry 7XJP. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
2 8Right-handed alpha
Helix 2
AA2
A
10 24Right-handed alpha
Helix 3
AA3
A
48 52Right-handed 310
Helix 4
AA4
A
87 98Right-handed alpha
Helix 5
AA5
A
99 101Right-handed 310
Helix 6
AA6
A
102 113Right-handed alpha
Helix 7
AA7
A
122 140Right-handed alpha
Helix 8
AA8
A
163 173Right-handed alpha
Helix 9
AA9
A
188 193Right-handed alpha
Helix 10
AB1
A
196 201Right-handed alpha
Helix 11
AB2
A
203 212Right-handed alpha
Helix 12
AB3
A
221 246Right-handed alpha
Helix 13
AB4
A
251 260Right-handed alpha
Helix 14
AB5
A
286 297Right-handed alpha
Helix 15
AB6
A
302 306Right-handed 310
Helix 16
AB7
A
307 317Right-handed alpha
Helix 17
AB8
A
319 326Right-handed alpha
Helix 18
AB9
A
341 349Right-handed alpha
Helix 19
AC1
A
351 380Right-handed alpha
Helix 20
AC2
A
381 394Right-handed alpha
Helix 21
AC3
A
394 402Right-handed alpha
Helix 22
AC4
A
405 413Right-handed alpha
Helix 23
AC5
A
415 442Right-handed alpha
Helix 24
AC6
A
446 451Right-handed alpha
Helix 25
AC7
A
452 476Right-handed alpha
Helix 26
AC8
A
478 483Right-handed alpha
Helix 27
AC9
A
484 489Right-handed alpha
Helix 28
AD1
A
491 506Right-handed alpha
Helix 29
AD2
A
547 556Right-handed alpha
Helix 30
AD3
A
559 581Right-handed alpha
Helix 31
AD4
A
584 589Right-handed alpha
Helix 32
AD5
A
593 601Right-handed alpha
Helix 33
AD6
A
603 609Right-handed alpha
Helix 34
AD7
B
4 20Right-handed alpha
Helix 35
AD8
B
20 34Right-handed alpha
Helix 36
AD9
B
77 81Right-handed 310
Helix 37
AE1
B
110 136Right-handed alpha
Helix 38
AE2
B
147 160Right-handed alpha
Helix 39
AE3
B
183 189Right-handed alpha
Helix 40
AE4
B
194 196Right-handed 310
Helix 41
AE5
B
232 241Right-handed alpha
Helix 42
AE6
B
250 262Right-handed alpha
Helix 43
AE7
B
272 317Right-handed alpha
Helix 44
AE8
B
320 331Right-handed alpha
Helix 45
AE9
B
334 343Right-handed alpha
Helix 46
AF1
B
343 360Right-handed alpha
Helix 47
AF2
B
372 396Right-handed alpha
Helix 48
AF3
B
400 405Right-handed alpha
Helix 49
AF4
B
407 422Right-handed alpha
Helix 50
AF5
B
443 461Right-handed alpha
Helix 51
AF6
B
466 489Right-handed alpha
Helix 52
AF7
B
493 498Right-handed 310
Helix 53
AF8
B
501 514Right-handed alpha
Helix 54
AF9
B
519 527Right-handed alpha
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There are 5 sheets in PDB entry 7XJP. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5,

There are 8 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
31 35first strand
Strand 2
A
38 43anti-parallel
Strand 3
A
116 121parallel
Strand 4
A
152 156parallel
Strand 5
A
179 184parallel
Strand 6
A
272 276parallel
Strand 7
A
280 284anti-parallel
Strand 8
A
331 334parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
63 65first strand
Strand 2
A
84 86anti-parallel
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There are 7 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
56 61first strand
Strand 2
B
66 71anti-parallel
Strand 3
B
140 144parallel
Strand 4
B
172 175parallel
Strand 5
B
198 203parallel
Strand 6
B
218 222parallel
Strand 7
B
227 230anti-parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
83 84first strand
Strand 2
B
108 109anti-parallel
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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
181 182first strand
Strand 2
B
213 214anti-parallel
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