Analysis of interatomic Contacts of Structural Units in PDB entry:
7XJV

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 7XJV entry

There are 4 chains in PDB entry 7XJV (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	CYS 4	ILE 518
B	CYS 4	ILE 518
C	TRP 5	ILE 518
D	CYS 4	ILE 518

There are100 helices in PDB entry 7XJV. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	4	11	Right-handed alpha
Helix 2	AA2	A	28	47	Right-handed alpha
Helix 3	AA3	A	55	66	Right-handed alpha
Helix 4	AA4	A	70	76	Right-handed alpha
Helix 5	AA5	A	77	82	Right-handed alpha
Helix 6	AA6	A	120	128	Right-handed alpha
Helix 7	AA7	A	142	144	Right-handed 310
Helix 8	AA8	A	145	159	Right-handed alpha
Helix 9	AA9	A	174	187	Right-handed alpha
Helix 10	AB1	A	216	218	Right-handed 310
Helix 11	AB2	A	219	228	Right-handed alpha
Helix 12	AB3	A	245	252	Right-handed alpha
Helix 13	AB4	A	252	259	Right-handed alpha
Helix 14	AB5	A	274	290	Right-handed alpha
Helix 15	AB6	A	295	297	Right-handed 310
Helix 16	AB7	A	298	303	Right-handed alpha
Helix 17	AB8	A	305	317	Right-handed alpha
Helix 18	AB9	A	332	348	Right-handed alpha
Helix 19	AC1	A	351	355	Right-handed 310
Helix 20	AC2	A	360	370	Right-handed alpha
Helix 21	AC3	A	429	437	Right-handed alpha
Helix 22	AC4	A	437	444	Right-handed alpha
Helix 23	AC5	A	446	456	Right-handed alpha
Helix 24	AC6	A	477	482	Right-handed alpha
Helix 25	AC7	A	500	515	Right-handed alpha
Helix 26	AC8	B	5	11	Right-handed alpha
Helix 27	AC9	B	28	47	Right-handed alpha
Helix 28	AD1	B	54	66	Right-handed alpha
Helix 29	AD2	B	70	76	Right-handed alpha
Helix 30	AD3	B	77	82	Right-handed alpha
Helix 31	AD4	B	120	128	Right-handed alpha
Helix 32	AD5	B	142	144	Right-handed 310
Helix 33	AD6	B	145	159	Right-handed alpha
Helix 34	AD7	B	174	187	Right-handed alpha
Helix 35	AD8	B	216	218	Right-handed 310
Helix 36	AD9	B	219	228	Right-handed alpha
Helix 37	AE1	B	245	252	Right-handed alpha
Helix 38	AE2	B	252	259	Right-handed alpha
Helix 39	AE3	B	274	290	Right-handed alpha
Helix 40	AE4	B	295	297	Right-handed 310
Helix 41	AE5	B	298	303	Right-handed alpha
Helix 42	AE6	B	305	317	Right-handed alpha
Helix 43	AE7	B	332	348	Right-handed alpha
Helix 44	AE8	B	351	355	Right-handed 310
Helix 45	AE9	B	360	369	Right-handed alpha
Helix 46	AF1	B	429	437	Right-handed alpha
Helix 47	AF2	B	437	444	Right-handed alpha
Helix 48	AF3	B	446	456	Right-handed alpha
Helix 49	AF4	B	477	482	Right-handed alpha
Helix 50	AF5	B	500	515	Right-handed alpha
Helix 51	AF6	C	6	11	Right-handed alpha
Helix 52	AF7	C	28	47	Right-handed alpha
Helix 53	AF8	C	55	66	Right-handed alpha
Helix 54	AF9	C	70	76	Right-handed alpha
Helix 55	AG1	C	77	82	Right-handed alpha
Helix 56	AG2	C	120	128	Right-handed alpha
Helix 57	AG3	C	142	144	Right-handed 310
Helix 58	AG4	C	145	159	Right-handed alpha
Helix 59	AG5	C	174	187	Right-handed alpha
Helix 60	AG6	C	216	218	Right-handed 310
Helix 61	AG7	C	219	228	Right-handed alpha
Helix 62	AG8	C	245	252	Right-handed alpha
Helix 63	AG9	C	252	259	Right-handed alpha
Helix 64	AH1	C	274	290	Right-handed alpha
Helix 65	AH2	C	295	297	Right-handed 310
Helix 66	AH3	C	298	303	Right-handed alpha
Helix 67	AH4	C	305	317	Right-handed alpha
Helix 68	AH5	C	332	348	Right-handed alpha
Helix 69	AH6	C	351	355	Right-handed 310
Helix 70	AH7	C	360	369	Right-handed alpha
Helix 71	AH8	C	429	437	Right-handed alpha
Helix 72	AH9	C	437	444	Right-handed alpha
Helix 73	AI1	C	446	456	Right-handed alpha
Helix 74	AI2	C	477	482	Right-handed alpha
Helix 75	AI3	C	500	515	Right-handed alpha
Helix 76	AI4	D	5	11	Right-handed alpha
Helix 77	AI5	D	28	47	Right-handed alpha
Helix 78	AI6	D	55	66	Right-handed alpha
Helix 79	AI7	D	70	76	Right-handed alpha
Helix 80	AI8	D	77	82	Right-handed alpha
Helix 81	AI9	D	120	128	Right-handed alpha
Helix 82	AJ1	D	142	144	Right-handed 310
Helix 83	AJ2	D	145	159	Right-handed alpha
Helix 84	AJ3	D	174	187	Right-handed alpha
Helix 85	AJ4	D	216	218	Right-handed 310
Helix 86	AJ5	D	219	228	Right-handed alpha
Helix 87	AJ6	D	245	252	Right-handed alpha
Helix 88	AJ7	D	252	259	Right-handed alpha
Helix 89	AJ8	D	274	290	Right-handed alpha
Helix 90	AJ9	D	295	297	Right-handed 310
Helix 91	AK1	D	298	303	Right-handed alpha
Helix 92	AK2	D	305	317	Right-handed alpha
Helix 93	AK3	D	332	348	Right-handed alpha
Helix 94	AK4	D	351	355	Right-handed 310
Helix 95	AK5	D	360	369	Right-handed alpha
Helix 96	AK6	D	429	437	Right-handed alpha
Helix 97	AK7	D	437	444	Right-handed alpha
Helix 98	AK8	D	446	456	Right-handed alpha
Helix 99	AK9	D	477	482	Right-handed alpha
Helix 100	AL1	D	500	515	Right-handed alpha

There are 16 sheets in PDB entry 7XJV. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7,

There are 8 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	92	94	first strand
Strand 2	A	84	87	anti-parallel
Strand 3	A	198	202	anti-parallel
Strand 4	A	165	169	parallel
Strand 5	A	131	140	parallel
Strand 6	A	230	236	parallel
Strand 7	A	324	331	anti-parallel
Strand 8	A	260	264	anti-parallel

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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	96	100	first strand
Strand 2	A	107	112	anti-parallel

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There are 6 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	241	242	first strand
Strand 2	A	415	419	anti-parallel
Strand 3	A	406	409	anti-parallel
Strand 4	A	381	384	anti-parallel
Strand 5	A	462	465	anti-parallel
Strand 6	A	495	498	anti-parallel

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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	387	388	first strand
Strand 2	A	398	403	anti-parallel
Strand 3	A	484	489	anti-parallel
Strand 4	A	474	475	anti-parallel

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There are 8 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	92	94	first strand
Strand 2	B	84	87	anti-parallel
Strand 3	B	198	202	anti-parallel
Strand 4	B	165	169	parallel
Strand 5	B	131	140	parallel
Strand 6	B	230	236	parallel
Strand 7	B	324	331	anti-parallel
Strand 8	B	260	264	anti-parallel

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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	96	100	first strand
Strand 2	B	107	112	anti-parallel

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There are 6 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	241	242	first strand
Strand 2	B	415	419	anti-parallel
Strand 3	B	406	409	anti-parallel
Strand 4	B	381	384	anti-parallel
Strand 5	B	462	465	anti-parallel
Strand 6	B	495	498	anti-parallel

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There are 4 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	387	388	first strand
Strand 2	B	398	403	anti-parallel
Strand 3	B	484	489	anti-parallel
Strand 4	B	474	475	anti-parallel

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There are 8 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	92	94	first strand
Strand 2	C	84	87	anti-parallel
Strand 3	C	198	202	anti-parallel
Strand 4	C	165	169	parallel
Strand 5	C	131	140	parallel
Strand 6	C	230	236	parallel
Strand 7	C	324	331	anti-parallel
Strand 8	C	260	264	anti-parallel

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There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	96	100	first strand
Strand 2	C	107	112	anti-parallel

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There are 6 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	241	242	first strand
Strand 2	C	415	419	anti-parallel
Strand 3	C	406	409	anti-parallel
Strand 4	C	381	384	anti-parallel
Strand 5	C	462	465	anti-parallel
Strand 6	C	495	498	anti-parallel

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There are 4 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	387	388	first strand
Strand 2	C	398	403	anti-parallel
Strand 3	C	484	489	anti-parallel
Strand 4	C	474	475	anti-parallel

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There are 8 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	92	94	first strand
Strand 2	D	84	87	anti-parallel
Strand 3	D	198	202	anti-parallel
Strand 4	D	165	169	parallel
Strand 5	D	131	140	parallel
Strand 6	D	230	236	parallel
Strand 7	D	324	331	anti-parallel
Strand 8	D	260	264	anti-parallel

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There are 2 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	96	100	first strand
Strand 2	D	107	112	anti-parallel

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There are 6 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	241	242	first strand
Strand 2	D	415	419	anti-parallel
Strand 3	D	406	409	anti-parallel
Strand 4	D	381	384	anti-parallel
Strand 5	D	462	465	anti-parallel
Strand 6	D	495	498	anti-parallel

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There are 4 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	387	388	first strand
Strand 2	D	398	403	anti-parallel
Strand 3	D	484	489	anti-parallel
Strand 4	D	474	475	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 7XJV

Analysis of interatomic Contacts of Structural Units in PDB entry:
7XJV