Analysis of interatomic Contacts of Structural Units in PDB entry:
7XKS


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7XKS entry

There is 1 chain in PDB entry 7XKS (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASN 27PRO 327
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 4 helices in PDB entry 7XKS. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
31 36Right-handed 310
Helix 2
AA2
A
53 63Right-handed alpha
Helix 3
AA3
A
79 83Right-handed 310
Helix 4
AA4
A
308 320Right-handed alpha
Back to top of page

There are 3 sheets in PDB entry 7XKS. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3,

There are 10 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
47 51first strand
Strand 2
A
70 78parallel
Strand 3
A
88 108parallel
Strand 4
A
112 123parallel
Strand 5
A
144 150parallel
Strand 6
A
175 181parallel
Strand 7
A
205 209parallel
Strand 8
A
227 231parallel
Strand 9
A
250 254parallel
Strand 10
A
275 279parallel
Back to list of sheets
Back to top of page

There are 11 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
169 172first strand
Strand 2
A
138 141parallel
Strand 3
A
112 123parallel
Strand 4
A
88 108parallel
Strand 5
A
126 128parallel
Strand 6
A
153 155parallel
Strand 7
A
184 190parallel
Strand 8
A
212 218parallel
Strand 9
A
234 238parallel
Strand 10
A
257 261parallel
Strand 11
A
282 284parallel
Back to list of sheets
Back to top of page

There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
193 194first strand
Strand 2
A
222 224parallel
Strand 3
A
243 246parallel
Strand 4
A
265 266parallel
Back to list of sheets
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il