Analysis of interatomic Contacts of Structural Units in PDB entry:
7XLI


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7XLI entry

There are 2 chains in PDB entry 7XLI (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 342LYS 451
B
 GLU 1SER 125
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 7 helices in PDB entry 7XLI. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
361 367Right-handed 310
Helix 2
AA2
A
388 392Right-handed 310
Helix 3
AA3
A
436 439Right-handed 310
Helix 4
AA4
B
28 32Right-handed 310
Helix 5
AA5
B
77 79Right-handed 310
Helix 6
AA6
B
90 94Right-handed 310
Helix 7
AA7
B
108 112Right-handed 310
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There are 5 sheets in PDB entry 7XLI. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
346 347first strand
Strand 2
A
372 376anti-parallel
Strand 3
A
379 385anti-parallel
Strand 4
A
414 419anti-parallel
Strand 5
A
403 407anti-parallel
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There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
350 354first strand
Strand 2
A
440 450anti-parallel
Strand 3
A
426 435anti-parallel
Strand 4
A
393 397anti-parallel
Strand 5
A
400 401anti-parallel
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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
3 7first strand
Strand 2
B
18 25anti-parallel
Strand 3
B
81 86anti-parallel
Strand 4
B
71 76anti-parallel
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There are 6 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
11 12first strand
Strand 2
B
119 123parallel
Strand 3
B
95 102anti-parallel
Strand 4
B
36 42anti-parallel
Strand 5
B
49 55anti-parallel
Strand 6
B
60 63anti-parallel
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There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
11 12first strand
Strand 2
B
119 123parallel
Strand 3
B
95 102anti-parallel
Strand 4
B
114 115anti-parallel
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