Analysis of interatomic Contacts of Structural Units in PDB entry:
7XLL


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7XLL entry

There are 4 chains in PDB entry 7XLL (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1LEU 40
A
 ALA 42ASN 378
B
 MET 1LEU 40
B
 ALA 42ASN 378
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 33 helices in PDB entry 7XLL. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
14 29Right-handed alpha
Helix 2
AA2
A
40 46Right-handed alpha
Helix 3
AA3
A
48 59Right-handed alpha
Helix 4
AA4
A
68 78Right-handed alpha
Helix 5
AA5
A
91 93Right-handed 310
Helix 6
AA6
A
94 101Right-handed alpha
Helix 7
AA7
A
109 122Right-handed alpha
Helix 8
AA8
A
146 160Right-handed alpha
Helix 9
AA9
A
181 196Right-handed alpha
Helix 10
AB1
A
209 216Right-handed alpha
Helix 11
AB2
A
217 220Right-handed 310
Helix 12
AB3
A
270 274Right-handed 310
Helix 13
AB4
A
289 293Right-handed 310
Helix 14
AB5
A
295 299Right-handed 310
Helix 15
AB6
A
347 355Right-handed alpha
Helix 16
AB7
A
358 365Right-handed alpha
Helix 17
AB8
B
14 29Right-handed alpha
Helix 18
AB9
B
40 46Right-handed alpha
Helix 19
AC1
B
48 60Right-handed alpha
Helix 20
AC2
B
68 78Right-handed alpha
Helix 21
AC3
B
91 93Right-handed 310
Helix 22
AC4
B
94 101Right-handed alpha
Helix 23
AC5
B
109 122Right-handed alpha
Helix 24
AC6
B
146 160Right-handed alpha
Helix 25
AC7
B
181 197Right-handed alpha
Helix 26
AC8
B
209 216Right-handed alpha
Helix 27
AC9
B
217 220Right-handed 310
Helix 28
AD1
B
227 232Right-handed 310
Helix 29
AD2
B
270 274Right-handed 310
Helix 30
AD3
B
289 293Right-handed 310
Helix 31
AD4
B
295 299Right-handed 310
Helix 32
AD5
B
347 355Right-handed alpha
Helix 33
AD6
B
358 365Right-handed alpha
Back to top of page

There are 10 sheets in PDB entry 7XLL. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
344 346first strand
Strand 2
A
334 341anti-parallel
Strand 3
A
251 256anti-parallel
Strand 4
A
10 13anti-parallel
Strand 5
A
372 374parallel
Back to list of sheets
Back to top of page

There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
35 36first strand
Strand 2
A
223 224parallel
Back to list of sheets
Back to top of page

There are 6 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
64 66first strand
Strand 2
A
84 89parallel
Strand 3
A
103 107parallel
Strand 4
A
129 134parallel
Strand 5
A
164 170parallel
Strand 6
A
204 206parallel
Back to list of sheets
Back to top of page

There are 5 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
259 263first strand
Strand 2
A
281 286anti-parallel
Strand 3
A
321 325anti-parallel
Strand 4
A
308 313anti-parallel
Strand 5
A
302 305anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
268 269first strand
Strand 2
A
275 276anti-parallel
Back to list of sheets
Back to top of page

There are 5 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
344 346first strand
Strand 2
B
334 341anti-parallel
Strand 3
B
251 256anti-parallel
Strand 4
B
10 13anti-parallel
Strand 5
B
372 374parallel
Back to list of sheets
Back to top of page

There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
35 36first strand
Strand 2
B
223 224parallel
Back to list of sheets
Back to top of page

There are 6 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
64 66first strand
Strand 2
B
84 89parallel
Strand 3
B
104 107parallel
Strand 4
B
129 134parallel
Strand 5
B
164 170parallel
Strand 6
B
204 206parallel
Back to list of sheets
Back to top of page

There are 5 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
259 263first strand
Strand 2
B
281 286anti-parallel
Strand 3
B
321 325anti-parallel
Strand 4
B
308 313anti-parallel
Strand 5
B
302 305anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
268 269first strand
Strand 2
B
275 276anti-parallel
Back to list of sheets
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il