Analysis of interatomic Contacts of Structural Units in PDB entry:
7XLO


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7XLO entry

There are 2 chains in PDB entry 7XLO (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1ALA 383
B
 MET 1GLU 382
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 31 helices in PDB entry 7XLO. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
1 9Right-handed alpha
Helix 2
AA2
A
14 16Right-handed 310
Helix 3
AA3
A
28 32Right-handed 310
Helix 4
AA4
A
57 68Right-handed alpha
Helix 5
AA5
A
78 91Right-handed alpha
Helix 6
AA6
A
123 133Right-handed alpha
Helix 7
AA7
A
147 153Right-handed alpha
Helix 8
AA8
A
159 163Right-handed alpha
Helix 9
AA9
A
175 182Right-handed alpha
Helix 10
AB1
A
201 207Right-handed alpha
Helix 11
AB2
A
211 224Right-handed alpha
Helix 12
AB3
A
225 227Right-handed 310
Helix 13
AB4
A
238 248Right-handed alpha
Helix 14
AB5
A
256 260Right-handed 310
Helix 15
AB6
A
328 348Right-handed alpha
Helix 16
AB7
A
351 359Right-handed alpha
Helix 17
AB8
B
2 8Right-handed alpha
Helix 18
AB9
B
14 16Right-handed 310
Helix 19
AC1
B
28 32Right-handed 310
Helix 20
AC2
B
57 68Right-handed alpha
Helix 21
AC3
B
78 91Right-handed alpha
Helix 22
AC4
B
123 133Right-handed alpha
Helix 23
AC5
B
147 153Right-handed alpha
Helix 24
AC6
B
158 163Right-handed alpha
Helix 25
AC7
B
175 182Right-handed alpha
Helix 26
AC8
B
201 207Right-handed alpha
Helix 27
AC9
B
211 224Right-handed alpha
Helix 28
AD1
B
225 227Right-handed 310
Helix 29
AD2
B
238 248Right-handed alpha
Helix 30
AD3
B
328 348Right-handed alpha
Helix 31
AD4
B
351 359Right-handed alpha
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There are 8 sheets in PDB entry 7XLO. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
18 20first strand
Strand 2
A
361 363anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
36 38first strand
Strand 2
A
41 43anti-parallel
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There are 8 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
47 49first strand
Strand 2
A
252 255parallel
Strand 3
A
230 233parallel
Strand 4
A
189 192parallel
Strand 5
A
167 173parallel
Strand 6
A
137 141parallel
Strand 7
A
116 119parallel
Strand 8
A
72 73parallel
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There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
269 272first strand
Strand 2
A
275 281anti-parallel
Strand 3
A
320 324anti-parallel
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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
18 20first strand
Strand 2
B
361 363anti-parallel
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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
36 38first strand
Strand 2
B
41 43anti-parallel
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There are 8 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
47 49first strand
Strand 2
B
252 255parallel
Strand 3
B
230 233parallel
Strand 4
B
189 192parallel
Strand 5
B
168 173parallel
Strand 6
B
137 140parallel
Strand 7
B
115 119parallel
Strand 8
B
71 73parallel
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There are 3 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
270 272first strand
Strand 2
B
275 280anti-parallel
Strand 3
B
321 324anti-parallel
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