Analysis of interatomic Contacts of Structural Units in PDB entry:
7XLQ

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 7XLQ entry

There are 3 chains in PDB entry 7XLQ (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	ASN 76	ALA 1871
D	PHE 27	GLY 1072
B	PRO 227	THR 412

There are113 helices in PDB entry 7XLQ. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	83	87	Right-handed 310
Helix 2	AA2	A	88	93	Right-handed alpha
Helix 3	AA3	A	94	109	Right-handed alpha
Helix 4	AA4	A	118	125	Right-handed alpha
Helix 5	AA5	A	127	146	Right-handed alpha
Helix 6	AA6	A	154	157	Right-handed 310
Helix 7	AA7	A	158	175	Right-handed alpha
Helix 8	AA8	A	192	197	Right-handed 310
Helix 9	AA9	A	198	204	Right-handed alpha
Helix 10	AB1	A	204	218	Right-handed alpha
Helix 11	AB2	A	223	244	Right-handed alpha
Helix 12	AB3	A	297	307	Right-handed alpha
Helix 13	AB4	A	310	321	Right-handed alpha
Helix 14	AB5	A	327	339	Right-handed alpha
Helix 15	AB6	A	339	359	Right-handed alpha
Helix 16	AB7	A	360	386	Right-handed alpha
Helix 17	AB8	A	461	473	Right-handed alpha
Helix 18	AB9	A	475	483	Right-handed alpha
Helix 19	AC1	A	488	493	Right-handed alpha
Helix 20	AC2	A	501	526	Right-handed alpha
Helix 21	AC3	A	538	560	Right-handed alpha
Helix 22	AC4	A	569	583	Right-handed 310
Helix 23	AC5	A	585	599	Right-handed alpha
Helix 24	AC6	A	603	608	Right-handed alpha
Helix 25	AC7	A	611	626	Right-handed alpha
Helix 26	AC8	A	642	655	Right-handed alpha
Helix 27	AC9	A	658	669	Right-handed alpha
Helix 28	AD1	A	677	680	Right-handed 310
Helix 29	AD2	A	681	689	Right-handed alpha
Helix 30	AD3	A	692	712	Right-handed alpha
Helix 31	AD4	A	713	721	Right-handed alpha
Helix 32	AD5	A	723	728	Right-handed alpha
Helix 33	AD6	A	776	785	Right-handed alpha
Helix 34	AD7	A	1144	1146	Right-handed 310
Helix 35	AD8	A	1147	1152	Right-handed alpha
Helix 36	AD9	A	1154	1167	Right-handed alpha
Helix 37	AE1	A	1167	1172	Right-handed alpha
Helix 38	AE2	A	1180	1207	Right-handed alpha
Helix 39	AE3	A	1223	1243	Right-handed alpha
Helix 40	AE4	A	1250	1258	Right-handed alpha
Helix 41	AE5	A	1259	1266	Right-handed 310
Helix 42	AE6	A	1267	1272	Right-handed alpha
Helix 43	AE7	A	1275	1287	Right-handed alpha
Helix 44	AE8	A	1294	1307	Right-handed alpha
Helix 45	AE9	A	1307	1312	Right-handed alpha
Helix 46	AF1	A	1357	1370	Right-handed alpha
Helix 47	AF2	A	1374	1383	Right-handed alpha
Helix 48	AF3	A	1396	1400	Right-handed 310
Helix 49	AF4	A	1401	1410	Right-handed alpha
Helix 50	AF5	A	1412	1425	Right-handed alpha
Helix 51	AF6	A	1433	1438	Right-handed alpha
Helix 52	AF7	A	1441	1447	Right-handed alpha
Helix 53	AF8	A	1467	1476	Right-handed alpha
Helix 54	AF9	A	1486	1491	Right-handed alpha
Helix 55	AG1	A	1505	1526	Right-handed alpha
Helix 56	AG2	A	1528	1533	Right-handed alpha
Helix 57	AG3	A	1533	1538	Right-handed alpha
Helix 58	AG4	A	1543	1560	Right-handed alpha
Helix 59	AG5	A	1571	1574	Right-handed 310
Helix 60	AG6	A	1575	1580	Right-handed alpha
Helix 61	AG7	A	1583	1590	Right-handed 310
Helix 62	AG8	A	1592	1603	Right-handed alpha
Helix 63	AG9	A	1609	1630	Right-handed alpha
Helix 64	AH1	A	1648	1661	Right-handed alpha
Helix 65	AH2	A	1666	1671	Right-handed alpha
Helix 66	AH3	A	1698	1723	Right-handed alpha
Helix 67	AH4	A	1725	1730	Right-handed alpha
Helix 68	AH5	A	1737	1740	Right-handed 310
Helix 69	AH6	A	1741	1753	Right-handed alpha
Helix 70	AH7	A	1762	1771	Right-handed alpha
Helix 71	AH8	A	1783	1793	Right-handed alpha
Helix 72	AH9	A	1804	1817	Right-handed alpha
Helix 73	AI1	A	1825	1843	Right-handed alpha
Helix 74	AI2	A	1847	1855	Right-handed alpha
Helix 75	AI3	A	1864	1871	Right-handed alpha
Helix 76	AI4	D	29	52	Right-handed alpha
Helix 77	AI5	D	53	64	Right-handed alpha
Helix 78	AI6	D	74	110	Right-handed alpha
Helix 79	AI7	D	134	138	Right-handed 310
Helix 80	AI8	D	176	185	Right-handed alpha
Helix 81	AI9	D	187	200	Right-handed alpha
Helix 82	AJ1	D	237	240	Right-handed 310
Helix 83	AJ2	D	241	249	Right-handed alpha
Helix 84	AJ3	D	261	265	Right-handed 310
Helix 85	AJ4	D	266	281	Right-handed alpha
Helix 86	AJ5	D	311	323	Right-handed alpha
Helix 87	AJ6	D	332	345	Right-handed alpha
Helix 88	AJ7	D	369	377	Right-handed alpha
Helix 89	AJ8	D	396	406	Right-handed alpha
Helix 90	AJ9	D	418	431	Right-handed alpha
Helix 91	AK1	D	431	437	Right-handed alpha
Helix 92	AK2	D	494	498	Right-handed alpha
Helix 93	AK3	D	569	580	Right-handed alpha
Helix 94	AK4	D	639	646	Right-handed alpha
Helix 95	AK5	D	647	649	Right-handed 310
Helix 96	AK6	D	675	689	Right-handed alpha
Helix 97	AK7	D	698	719	Right-handed alpha
Helix 98	AK8	D	747	752	Right-handed 310
Helix 99	AK9	D	757	760	Right-handed 310
Helix 100	AL1	D	761	770	Right-handed alpha
Helix 101	AL2	D	817	826	Right-handed alpha
Helix 102	AL3	D	866	871	Right-handed 310
Helix 103	AL4	D	874	878	Right-handed 310
Helix 104	AL5	D	879	890	Right-handed alpha
Helix 105	AL6	B	242	260	Right-handed alpha
Helix 106	AL7	B	272	276	Right-handed 310
Helix 107	AL8	B	305	314	Right-handed alpha
Helix 108	AL9	B	329	333	Right-handed 310
Helix 109	AM1	B	348	359	Right-handed alpha
Helix 110	AM2	B	362	365	Right-handed 310
Helix 111	AM3	B	366	379	Right-handed alpha
Helix 112	AM4	B	381	385	Right-handed 310
Helix 113	AM5	B	393	412	Right-handed alpha

There are 17 sheets in PDB entry 7XLQ. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	249	253	first strand
Strand 2	A	277	281	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	1316	1318	first strand
Strand 2	A	1348	1350	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	1332	1335	first strand
Strand 2	A	1342	1345	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	68	72	first strand
Strand 2	D	629	633	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	142	144	first strand
Strand 2	D	122	126	parallel
Strand 3	D	165	166	parallel

Back to list of sheets
Back to top of page

There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	150	152	first strand
Strand 2	D	157	159	anti-parallel

Back to list of sheets
Back to top of page

There are 5 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	215	217	first strand
Strand 2	D	206	210	anti-parallel
Strand 3	D	484	493	anti-parallel
Strand 4	D	458	467	anti-parallel
Strand 5	D	445	446	anti-parallel

Back to list of sheets
Back to top of page

There are 5 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	215	217	first strand
Strand 2	D	206	210	anti-parallel
Strand 3	D	484	493	anti-parallel
Strand 4	D	458	467	anti-parallel
Strand 5	D	450	451	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	298	300	first strand
Strand 2	D	288	294	anti-parallel
Strand 3	D	308	309	anti-parallel

Back to list of sheets
Back to top of page

There are 6 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	298	300	first strand
Strand 2	D	288	294	anti-parallel
Strand 3	D	253	258	parallel
Strand 4	D	357	362	parallel
Strand 5	D	383	389	parallel
Strand 6	D	409	413	parallel

Back to list of sheets
Back to top of page

There are 4 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	511	513	first strand
Strand 2	D	618	624	anti-parallel
Strand 3	D	604	611	anti-parallel
Strand 4	D	584	589	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	592	593	first strand
Strand 2	D	600	601	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	729	736	first strand
Strand 2	D	810	816	anti-parallel
Strand 3	D	792	797	anti-parallel
Strand 4	D	774	776	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	800	802	first strand
Strand 2	D	805	807	anti-parallel

Back to list of sheets
Back to top of page

There are 5 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	859	862	first strand
Strand 2	D	849	854	anti-parallel
Strand 3	D	1013	1018	anti-parallel
Strand 4	D	1001	1007	anti-parallel
Strand 5	D	989	994	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	892	904	first strand
Strand 2	D	972	983	anti-parallel
Strand 3	D	1036	1037	anti-parallel

Back to list of sheets
Back to top of page

There are 5 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	264	268	first strand
Strand 2	B	318	322	parallel
Strand 3	B	232	235	parallel
Strand 4	B	340	344	parallel
Strand 5	B	387	389	parallel

Back to list of sheets
Back to top of page

Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 7XLQ

Analysis of interatomic Contacts of Structural Units in PDB entry:
7XLQ