Analysis of interatomic Contacts of Structural Units in PDB entry:
7XLY


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7XLY entry

There are 8 chains in PDB entry 7XLY (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
C
 ARG 12ALA 98
C
 GLY 100ALA 440
A
 THR 11ALA 98
A
 GLY 100ALA 440
B
 THR 11ALA 98
B
 GLY 100ALA 440
D
 ARG 12ALA 98
D
 GLY 100ALA 440
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 62 helices in PDB entry 7XLY. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
C
36 53Right-handed alpha
Helix 2
AA2
C
75 83Right-handed alpha
Helix 3
AA3
C
97 99Right-handed 310
Helix 4
AA4
C
100 115Right-handed alpha
Helix 5
AA5
C
159 163Right-handed 310
Helix 6
AA6
C
182 195Right-handed alpha
Helix 7
AA7
C
197 218Right-handed alpha
Helix 8
AA8
C
219 224Right-handed 310
Helix 9
AA9
C
242 247Right-handed alpha
Helix 10
AB1
C
281 289Right-handed alpha
Helix 11
AB2
C
316 329Right-handed alpha
Helix 12
AB3
C
344 357Right-handed alpha
Helix 13
AB4
C
357 362Right-handed alpha
Helix 14
AB5
C
375 379Right-handed 310
Helix 15
AB6
C
384 389Right-handed alpha
Helix 16
AB7
C
393 414Right-handed alpha
Helix 17
AB8
A
36 53Right-handed alpha
Helix 18
AB9
A
75 84Right-handed alpha
Helix 19
AC1
A
97 99Right-handed 310
Helix 20
AC2
A
100 115Right-handed alpha
Helix 21
AC3
A
159 163Right-handed 310
Helix 22
AC4
A
182 195Right-handed alpha
Helix 23
AC5
A
197 218Right-handed alpha
Helix 24
AC6
A
242 247Right-handed alpha
Helix 25
AC7
A
282 288Right-handed alpha
Helix 26
AC8
A
315 328Right-handed alpha
Helix 27
AC9
A
344 355Right-handed alpha
Helix 28
AD1
A
357 364Right-handed alpha
Helix 29
AD2
A
375 379Right-handed 310
Helix 30
AD3
A
384 389Right-handed alpha
Helix 31
AD4
A
394 414Right-handed alpha
Helix 32
AD5
B
36 53Right-handed alpha
Helix 33
AD6
B
75 83Right-handed alpha
Helix 34
AD7
B
97 99Right-handed 310
Helix 35
AD8
B
100 115Right-handed alpha
Helix 36
AD9
B
159 163Right-handed 310
Helix 37
AE1
B
182 195Right-handed alpha
Helix 38
AE2
B
197 218Right-handed alpha
Helix 39
AE3
B
242 248Right-handed alpha
Helix 40
AE4
B
281 288Right-handed alpha
Helix 41
AE5
B
316 328Right-handed alpha
Helix 42
AE6
B
344 357Right-handed alpha
Helix 43
AE7
B
357 364Right-handed alpha
Helix 44
AE8
B
375 379Right-handed 310
Helix 45
AE9
B
384 389Right-handed alpha
Helix 46
AF1
B
394 414Right-handed alpha
Helix 47
AF2
D
36 53Right-handed alpha
Helix 48
AF3
D
75 83Right-handed alpha
Helix 49
AF4
D
97 99Right-handed 310
Helix 50
AF5
D
100 115Right-handed alpha
Helix 51
AF6
D
159 163Right-handed 310
Helix 52
AF7
D
182 195Right-handed alpha
Helix 53
AF8
D
197 218Right-handed alpha
Helix 54
AF9
D
219 224Right-handed 310
Helix 55
AG1
D
242 248Right-handed alpha
Helix 56
AG2
D
281 288Right-handed alpha
Helix 57
AG3
D
316 329Right-handed alpha
Helix 58
AG4
D
344 357Right-handed alpha
Helix 59
AG5
D
359 364Right-handed alpha
Helix 60
AG6
D
375 379Right-handed 310
Helix 61
AG7
D
384 389Right-handed alpha
Helix 62
AG8
D
394 414Right-handed alpha
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There are 6 sheets in PDB entry 7XLY. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6,

There are 10 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
16 22first strand
Strand 2
C
271 280anti-parallel
Strand 3
C
120 127anti-parallel
Strand 4
C
61 65parallel
Strand 5
C
92 96parallel
Strand 6
D
92 96anti-parallel
Strand 7
D
61 65parallel
Strand 8
D
120 127parallel
Strand 9
D
271 280anti-parallel
Strand 10
D
26 27anti-parallel
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There are 14 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
26 27first strand
Strand 2
C
271 280anti-parallel
Strand 3
C
120 127anti-parallel
Strand 4
C
61 65parallel
Strand 5
C
92 96parallel
Strand 6
D
92 96anti-parallel
Strand 7
D
61 65parallel
Strand 8
D
120 127parallel
Strand 9
D
271 280anti-parallel
Strand 10
D
16 22anti-parallel
Strand 11
D
294 303anti-parallel
Strand 12
D
432 440anti-parallel
Strand 13
D
420 428anti-parallel
Strand 14
D
337 340parallel
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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
295 303first strand
Strand 2
C
432 440anti-parallel
Strand 3
C
420 428anti-parallel
Strand 4
C
337 340parallel
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There are 10 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
26 27first strand
Strand 2
A
271 281anti-parallel
Strand 3
A
120 127anti-parallel
Strand 4
A
62 65parallel
Strand 5
A
92 96parallel
Strand 6
B
92 96anti-parallel
Strand 7
B
61 64parallel
Strand 8
B
120 127parallel
Strand 9
B
271 280anti-parallel
Strand 10
B
26 27anti-parallel
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There are 18 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
337 340first strand
Strand 2
A
420 428parallel
Strand 3
A
432 440anti-parallel
Strand 4
A
294 303anti-parallel
Strand 5
A
15 22anti-parallel
Strand 6
A
271 281anti-parallel
Strand 7
A
120 127anti-parallel
Strand 8
A
62 65parallel
Strand 9
A
92 96parallel
Strand 10
B
92 96anti-parallel
Strand 11
B
61 64parallel
Strand 12
B
120 127parallel
Strand 13
B
271 280anti-parallel
Strand 14
B
15 22anti-parallel
Strand 15
B
294 303anti-parallel
Strand 16
B
432 440anti-parallel
Strand 17
B
420 428anti-parallel
Strand 18
B
337 340parallel
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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
251 253first strand
Strand 2
D
262 263anti-parallel
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