Analysis of interatomic Contacts of Structural Units in PDB entry:
7XLZ


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7XLZ entry

There are 2 chains in PDB entry 7XLZ (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 10THR 261
B
 ARG 9GLN 262
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 18 helices in PDB entry 7XLZ. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
34 37Right-handed 310
Helix 2
AA2
A
40 44Right-handed 310
Helix 3
AA3
A
101 110Right-handed alpha
Helix 4
AA4
A
142 153Right-handed alpha
Helix 5
AA5
A
167 171Right-handed 310
Helix 6
AA6
A
192 200Right-handed alpha
Helix 7
AA7
A
215 227Right-handed alpha
Helix 8
AA8
A
232 234Right-handed 310
Helix 9
AA9
A
247 260Right-handed alpha
Helix 10
AB1
B
34 37Right-handed 310
Helix 11
AB2
B
40 44Right-handed 310
Helix 12
AB3
B
101 110Right-handed alpha
Helix 13
AB4
B
142 153Right-handed alpha
Helix 14
AB5
B
167 171Right-handed 310
Helix 15
AB6
B
192 200Right-handed alpha
Helix 16
AB7
B
215 227Right-handed alpha
Helix 17
AB8
B
232 234Right-handed 310
Helix 18
AB9
B
247 261Right-handed alpha
Back to top of page

There are 4 sheets in PDB entry 7XLZ. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 7 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
69 75first strand
Strand 2
A
47 53anti-parallel
Strand 3
A
115 122anti-parallel
Strand 4
A
11 23anti-parallel
Strand 5
A
26 32anti-parallel
Strand 6
A
85 91anti-parallel
Strand 7
A
78 80anti-parallel
Back to list of sheets
Back to top of page

There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
179 186first strand
Strand 2
A
158 165parallel
Strand 3
A
133 138parallel
Strand 4
A
207 214parallel
Strand 5
A
236 242parallel
Back to list of sheets
Back to top of page

There are 7 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
69 75first strand
Strand 2
B
47 53anti-parallel
Strand 3
B
115 122anti-parallel
Strand 4
B
11 23anti-parallel
Strand 5
B
26 32anti-parallel
Strand 6
B
85 91anti-parallel
Strand 7
B
78 80anti-parallel
Back to list of sheets
Back to top of page

There are 5 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
179 186first strand
Strand 2
B
158 165parallel
Strand 3
B
133 138parallel
Strand 4
B
207 214parallel
Strand 5
B
236 242parallel
Back to list of sheets
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il