Analysis of interatomic Contacts of Structural Units in PDB entry:
7XM0

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 7XM0 entry

There are 9 chains in PDB entry 7XM0 (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	MET 232	LEU 489
B	SER 236	LEU 489
C	SER 236	LEU 489
D	C 1	G 10
E	C 1	G 10
F	C 1	G 10
G	C 1	G 10
H	C 1	G 10
I	C 1	G 10

There are 34 helices in PDB entry 7XM0. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	236	246	Right-handed alpha
Helix 2	AA2	A	247	249	Right-handed 310
Helix 3	AA3	A	252	261	Right-handed alpha
Helix 4	AA4	A	268	279	Right-handed alpha
Helix 5	AA5	A	292	298	Right-handed alpha
Helix 6	AA6	A	324	330	Right-handed alpha
Helix 7	AA7	A	342	351	Right-handed alpha
Helix 8	AA8	A	377	382	Right-handed alpha
Helix 9	AA9	A	383	397	Right-handed alpha
Helix 10	AB1	A	422	426	Right-handed 310
Helix 11	AB2	A	477	485	Right-handed alpha
Helix 12	AB3	A	486	489	Right-handed 310
Helix 13	AB4	B	237	246	Right-handed alpha
Helix 14	AB5	B	247	249	Right-handed 310
Helix 15	AB6	B	252	260	Right-handed alpha
Helix 16	AB7	B	268	278	Right-handed alpha
Helix 17	AB8	B	324	331	Right-handed alpha
Helix 18	AB9	B	342	351	Right-handed alpha
Helix 19	AC1	B	377	383	Right-handed alpha
Helix 20	AC2	B	383	399	Right-handed alpha
Helix 21	AC3	B	477	485	Right-handed alpha
Helix 22	AC4	B	486	489	Right-handed 310
Helix 23	AC5	C	237	246	Right-handed alpha
Helix 24	AC6	C	247	249	Right-handed 310
Helix 25	AC7	C	252	261	Right-handed alpha
Helix 26	AC8	C	268	279	Right-handed alpha
Helix 27	AC9	C	292	298	Right-handed alpha
Helix 28	AD1	C	324	330	Right-handed alpha
Helix 29	AD2	C	342	351	Right-handed alpha
Helix 30	AD3	C	377	383	Right-handed alpha
Helix 31	AD4	C	383	397	Right-handed alpha
Helix 32	AD5	C	422	426	Right-handed 310
Helix 33	AD6	C	477	483	Right-handed alpha
Helix 34	AD7	C	484	489	Right-handed 310

There are 12 sheets in PDB entry 7XM0. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	301	308	first strand
Strand 2	A	352	360	parallel
Strand 3	A	366	374	anti-parallel

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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	318	322	first strand
Strand 2	A	472	476	anti-parallel
Strand 3	A	429	433	anti-parallel

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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	414	418	first strand
Strand 2	A	401	406	anti-parallel
Strand 3	A	454	456	parallel

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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	446	448	first strand
Strand 2	A	468	470	anti-parallel

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There are 3 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	301	308	first strand
Strand 2	B	352	360	parallel
Strand 3	B	366	374	anti-parallel

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There are 3 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	318	322	first strand
Strand 2	B	472	476	anti-parallel
Strand 3	B	429	433	anti-parallel

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There are 3 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	414	418	first strand
Strand 2	B	401	406	anti-parallel
Strand 3	B	454	456	parallel

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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	446	448	first strand
Strand 2	B	468	470	anti-parallel

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There are 3 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	301	308	first strand
Strand 2	C	352	360	parallel
Strand 3	C	366	374	anti-parallel

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There are 3 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	318	322	first strand
Strand 2	C	472	476	anti-parallel
Strand 3	C	429	433	anti-parallel

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There are 3 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	414	417	first strand
Strand 2	C	401	406	anti-parallel
Strand 3	C	454	456	parallel

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There are 2 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	446	448	first strand
Strand 2	C	468	470	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 7XM0

Analysis of interatomic Contacts of Structural Units in PDB entry:
7XM0