Analysis of interatomic Contacts of Structural Units in PDB entry:
7XM9


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7XM9 entry

There are 3 chains in PDB entry 7XM9 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 PRO 7GLU 1769
B
 GLY 20ALA 192
C
 SER 29SER 29
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 62 helices in PDB entry 7XM9. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
16 30Right-handed alpha
Helix 2
AA2
A
50 54Right-handed 310
Helix 3
AA3
A
60 64Right-handed 310
Helix 4
AA4
A
79 84Right-handed alpha
Helix 5
AA5
A
104 108Right-handed 310
Helix 6
AA6
A
113 124Right-handed alpha
Helix 7
AA7
A
125 144Right-handed alpha
Helix 8
AA8
A
151 175Right-handed alpha
Helix 9
AA9
A
187 204Right-handed alpha
Helix 10
AB1
A
209 215Right-handed alpha
Helix 11
AB2
A
216 221Right-handed 310
Helix 12
AB3
A
222 228Right-handed alpha
Helix 13
AB4
A
230 268Right-handed alpha
Helix 14
AB5
A
269 271Right-handed 310
Helix 15
AB6
A
285 291Right-handed alpha
Helix 16
AB7
A
295 301Right-handed alpha
Helix 17
AB8
A
337 341Right-handed 310
Helix 18
AB9
A
346 359Right-handed alpha
Helix 19
AC1
A
362 375Right-handed alpha
Helix 20
AC2
A
378 417Right-handed alpha
Helix 21
AC3
A
727 741Right-handed alpha
Helix 22
AC4
A
742 762Right-handed alpha
Helix 23
AC5
A
769 804Right-handed alpha
Helix 24
AC6
A
806 821Right-handed alpha
Helix 25
AC7
A
834 848Right-handed 310
Helix 26
AC8
A
849 863Right-handed alpha
Helix 27
AC9
A
866 895Right-handed alpha
Helix 28
AD1
A
896 899Right-handed 310
Helix 29
AD2
A
912 925Right-handed alpha
Helix 30
AD3
A
928 940Right-handed alpha
Helix 31
AD4
A
940 972Right-handed alpha
Helix 32
AD5
A
1176 1191Right-handed alpha
Helix 33
AD6
A
1191 1208Right-handed alpha
Helix 34
AD7
A
1213 1217Right-handed 310
Helix 35
AD8
A
1219 1255Right-handed alpha
Helix 36
AD9
A
1256 1279Right-handed alpha
Helix 37
AE1
A
1284 1291Right-handed alpha
Helix 38
AE2
A
1292 1301Right-handed 310
Helix 39
AE3
A
1304 1344Right-handed alpha
Helix 40
AE4
A
1366 1377Right-handed alpha
Helix 41
AE5
A
1391 1405Right-handed alpha
Helix 42
AE6
A
1408 1418Right-handed alpha
Helix 43
AE7
A
1433 1467Right-handed alpha
Helix 44
AE8
A
1475 1487Right-handed alpha
Helix 45
AE9
A
1488 1490Right-handed 310
Helix 46
AF1
A
1502 1514Right-handed alpha
Helix 47
AF2
A
1514 1534Right-handed alpha
Helix 48
AF3
A
1540 1570Right-handed alpha
Helix 49
AF4
A
1576 1603Right-handed alpha
Helix 50
AF5
A
1605 1614Right-handed alpha
Helix 51
AF6
A
1616 1621Right-handed alpha
Helix 52
AF7
A
1622 1626Right-handed 310
Helix 53
AF8
A
1627 1666Right-handed alpha
Helix 54
AF9
A
1683 1696Right-handed alpha
Helix 55
AG1
A
1699 1709Right-handed alpha
Helix 56
AG2
A
1732 1752Right-handed alpha
Helix 57
AG3
A
1754 1769Right-handed alpha
Helix 58
AG4
B
83 87Right-handed 310
Helix 59
AG5
B
153 191Right-handed alpha
Helix 60
AG6
C
92 96Right-handed 310
Helix 61
AG7
C
104 108Right-handed 310
Helix 62
AG8
C
118 122Right-handed 310
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There are 9 sheets in PDB entry 7XM9. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
74 75first strand
Strand 2
A
87 91anti-parallel
Strand 3
A
97 101anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
273 277first strand
Strand 2
A
328 332anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1349 1352first strand
Strand 2
A
1380 1383anti-parallel
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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
29 31first strand
Strand 2
B
135 147parallel
Strand 3
B
117 128anti-parallel
Strand 4
B
50 51anti-parallel
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There are 6 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
29 31first strand
Strand 2
B
135 147parallel
Strand 3
B
117 128anti-parallel
Strand 4
B
54 61anti-parallel
Strand 5
B
68 73anti-parallel
Strand 6
B
78 80anti-parallel
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There are 3 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
36 38first strand
Strand 2
B
106 108anti-parallel
Strand 3
B
90 92anti-parallel
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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
31 33first strand
Strand 2
C
51 53anti-parallel
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There are 6 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
37 40first strand
Strand 2
C
137 146parallel
Strand 3
C
123 130anti-parallel
Strand 4
C
64 70anti-parallel
Strand 5
C
78 84anti-parallel
Strand 6
C
87 89anti-parallel
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There are 3 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
46 48first strand
Strand 2
C
112 114anti-parallel
Strand 3
C
99 101anti-parallel
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