Analysis of interatomic Contacts of Structural Units in PDB entry:
7XMF


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7XMF entry

There are 3 chains in PDB entry 7XMF (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 PRO 114GLU 1768
B
 GLY 20ALA 192
C
 SER 29SER 29
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 58 helices in PDB entry 7XMF. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
114 124Right-handed alpha
Helix 2
AA2
A
125 144Right-handed alpha
Helix 3
AA3
A
151 175Right-handed alpha
Helix 4
AA4
A
180 185Right-handed alpha
Helix 5
AA5
A
188 204Right-handed alpha
Helix 6
AA6
A
209 215Right-handed alpha
Helix 7
AA7
A
218 228Right-handed alpha
Helix 8
AA8
A
230 268Right-handed alpha
Helix 9
AA9
A
269 271Right-handed 310
Helix 10
AB1
A
285 291Right-handed alpha
Helix 11
AB2
A
295 301Right-handed alpha
Helix 12
AB3
A
337 341Right-handed 310
Helix 13
AB4
A
346 359Right-handed alpha
Helix 14
AB5
A
362 375Right-handed alpha
Helix 15
AB6
A
378 417Right-handed alpha
Helix 16
AB7
A
727 741Right-handed alpha
Helix 17
AB8
A
745 762Right-handed alpha
Helix 18
AB9
A
769 799Right-handed alpha
Helix 19
AC1
A
800 805Right-handed alpha
Helix 20
AC2
A
806 821Right-handed alpha
Helix 21
AC3
A
834 847Right-handed 310
Helix 22
AC4
A
849 863Right-handed alpha
Helix 23
AC5
A
866 895Right-handed alpha
Helix 24
AC6
A
896 899Right-handed 310
Helix 25
AC7
A
912 925Right-handed alpha
Helix 26
AC8
A
928 940Right-handed alpha
Helix 27
AC9
A
940 972Right-handed alpha
Helix 28
AD1
A
1176 1191Right-handed alpha
Helix 29
AD2
A
1191 1208Right-handed alpha
Helix 30
AD3
A
1213 1217Right-handed 310
Helix 31
AD4
A
1219 1249Right-handed alpha
Helix 32
AD5
A
1249 1255Right-handed alpha
Helix 33
AD6
A
1256 1279Right-handed alpha
Helix 34
AD7
A
1284 1290Right-handed alpha
Helix 35
AD8
A
1291 1301Right-handed 310
Helix 36
AD9
A
1304 1344Right-handed alpha
Helix 37
AE1
A
1366 1377Right-handed alpha
Helix 38
AE2
A
1391 1405Right-handed alpha
Helix 39
AE3
A
1407 1418Right-handed alpha
Helix 40
AE4
A
1433 1467Right-handed alpha
Helix 41
AE5
A
1475 1487Right-handed alpha
Helix 42
AE6
A
1488 1490Right-handed 310
Helix 43
AE7
A
1502 1514Right-handed alpha
Helix 44
AE8
A
1514 1534Right-handed alpha
Helix 45
AE9
A
1540 1569Right-handed alpha
Helix 46
AF1
A
1572 1575Right-handed 310
Helix 47
AF2
A
1576 1603Right-handed alpha
Helix 48
AF3
A
1605 1614Right-handed alpha
Helix 49
AF4
A
1616 1622Right-handed alpha
Helix 50
AF5
A
1623 1626Right-handed 310
Helix 51
AF6
A
1627 1666Right-handed alpha
Helix 52
AF7
A
1683 1696Right-handed alpha
Helix 53
AF8
A
1699 1705Right-handed alpha
Helix 54
AF9
A
1732 1768Right-handed alpha
Helix 55
AG1
B
153 191Right-handed alpha
Helix 56
AG2
C
92 96Right-handed 310
Helix 57
AG3
C
104 108Right-handed 310
Helix 58
AG4
C
118 122Right-handed 310
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There are 7 sheets in PDB entry 7XMF. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
273 277first strand
Strand 2
A
328 332anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1349 1352first strand
Strand 2
A
1380 1383anti-parallel
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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
36 38first strand
Strand 2
B
106 108anti-parallel
Strand 3
B
90 92anti-parallel
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There are 5 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
78 80first strand
Strand 2
B
68 73anti-parallel
Strand 3
B
54 61anti-parallel
Strand 4
B
117 124anti-parallel
Strand 5
B
138 144anti-parallel
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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
31 33first strand
Strand 2
C
51 53anti-parallel
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There are 6 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
37 40first strand
Strand 2
C
137 146parallel
Strand 3
C
123 130anti-parallel
Strand 4
C
64 70anti-parallel
Strand 5
C
78 84anti-parallel
Strand 6
C
87 89anti-parallel
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There are 3 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
46 48first strand
Strand 2
C
112 114anti-parallel
Strand 3
C
99 101anti-parallel
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