Analysis of interatomic Contacts of Structural Units in PDB entry:
7XNZ

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 7XNZ entry

There are 4 chains in PDB entry 7XNZ (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
B	ILE 3	GLY 460
A	ILE 3	GLY 460
C	ILE 3	GLY 460
D	ILE 3	GLY 460

There are 75 helices in PDB entry 7XNZ. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	B	6	10	Right-handed 310
Helix 2	AA2	B	43	58	Right-handed alpha
Helix 3	AA3	B	74	87	Right-handed alpha
Helix 4	AA4	B	99	109	Right-handed alpha
Helix 5	AA5	B	127	139	Right-handed alpha
Helix 6	AA6	B	151	161	Right-handed alpha
Helix 7	AA7	B	161	169	Right-handed alpha
Helix 8	AA8	B	184	196	Right-handed alpha
Helix 9	AA9	B	247	262	Right-handed alpha
Helix 10	AB1	B	267	281	Right-handed alpha
Helix 11	AB2	B	299	304	Right-handed 310
Helix 12	AB3	B	307	314	Right-handed alpha
Helix 13	AB4	B	329	334	Right-handed alpha
Helix 14	AB5	B	335	338	Right-handed 310
Helix 15	AB6	B	352	364	Right-handed alpha
Helix 16	AB7	B	388	397	Right-handed alpha
Helix 17	AB8	B	405	409	Right-handed 310
Helix 18	AB9	B	422	431	Right-handed alpha
Helix 19	AC1	B	450	458	Right-handed alpha
Helix 20	AC2	A	6	10	Right-handed 310
Helix 21	AC3	A	43	58	Right-handed alpha
Helix 22	AC4	A	74	87	Right-handed alpha
Helix 23	AC5	A	99	109	Right-handed alpha
Helix 24	AC6	A	127	139	Right-handed alpha
Helix 25	AC7	A	151	161	Right-handed alpha
Helix 26	AC8	A	161	169	Right-handed alpha
Helix 27	AC9	A	184	196	Right-handed alpha
Helix 28	AD1	A	247	262	Right-handed alpha
Helix 29	AD2	A	267	281	Right-handed alpha
Helix 30	AD3	A	299	304	Right-handed 310
Helix 31	AD4	A	307	314	Right-handed alpha
Helix 32	AD5	A	329	334	Right-handed alpha
Helix 33	AD6	A	335	338	Right-handed 310
Helix 34	AD7	A	352	364	Right-handed alpha
Helix 35	AD8	A	388	397	Right-handed alpha
Helix 36	AD9	A	405	409	Right-handed 310
Helix 37	AE1	A	422	431	Right-handed alpha
Helix 38	AE2	A	450	458	Right-handed alpha
Helix 39	AE3	C	6	10	Right-handed 310
Helix 40	AE4	C	43	58	Right-handed alpha
Helix 41	AE5	C	74	87	Right-handed alpha
Helix 42	AE6	C	99	109	Right-handed alpha
Helix 43	AE7	C	127	139	Right-handed alpha
Helix 44	AE8	C	151	161	Right-handed alpha
Helix 45	AE9	C	161	169	Right-handed alpha
Helix 46	AF1	C	184	196	Right-handed alpha
Helix 47	AF2	C	247	262	Right-handed alpha
Helix 48	AF3	C	267	281	Right-handed alpha
Helix 49	AF4	C	299	304	Right-handed 310
Helix 50	AF5	C	307	314	Right-handed alpha
Helix 51	AF6	C	329	334	Right-handed alpha
Helix 52	AF7	C	335	338	Right-handed 310
Helix 53	AF8	C	352	364	Right-handed alpha
Helix 54	AF9	C	388	397	Right-handed alpha
Helix 55	AG1	C	405	409	Right-handed 310
Helix 56	AG2	C	422	431	Right-handed alpha
Helix 57	AG3	C	450	458	Right-handed alpha
Helix 58	AG4	D	6	10	Right-handed 310
Helix 59	AG5	D	43	58	Right-handed alpha
Helix 60	AG6	D	74	87	Right-handed alpha
Helix 61	AG7	D	99	109	Right-handed alpha
Helix 62	AG8	D	127	139	Right-handed alpha
Helix 63	AG9	D	151	161	Right-handed alpha
Helix 64	AH1	D	161	169	Right-handed alpha
Helix 65	AH2	D	184	196	Right-handed alpha
Helix 66	AH3	D	247	262	Right-handed alpha
Helix 67	AH4	D	267	281	Right-handed alpha
Helix 68	AH5	D	299	304	Right-handed 310
Helix 69	AH6	D	307	314	Right-handed alpha
Helix 70	AH7	D	330	338	Right-handed 310
Helix 71	AH8	D	352	364	Right-handed alpha
Helix 72	AH9	D	388	397	Right-handed alpha
Helix 73	AI1	D	405	409	Right-handed 310
Helix 74	AI2	D	422	431	Right-handed alpha
Helix 75	AI3	D	450	458	Right-handed alpha

There are 20 sheets in PDB entry 7XNZ. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	17	19	first strand
Strand 2	B	29	32	anti-parallel
Strand 3	B	289	292	parallel

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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	67	69	first strand
Strand 2	B	90	95	parallel
Strand 3	B	111	116	parallel

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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	175	179	first strand
Strand 2	B	202	208	parallel
Strand 3	B	245	246	parallel

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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	367	370	first strand
Strand 2	B	384	387	anti-parallel

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There are 3 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	416	418	first strand
Strand 2	B	435	440	parallel
Strand 3	B	443	449	anti-parallel

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There are 3 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	17	19	first strand
Strand 2	A	29	32	anti-parallel
Strand 3	A	289	292	parallel

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There are 3 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	67	69	first strand
Strand 2	A	90	95	parallel
Strand 3	A	111	116	parallel

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There are 3 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	175	179	first strand
Strand 2	A	202	208	parallel
Strand 3	A	245	246	parallel

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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	367	370	first strand
Strand 2	A	384	387	anti-parallel

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There are 3 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	416	418	first strand
Strand 2	A	435	440	parallel
Strand 3	A	443	449	anti-parallel

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There are 3 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	17	19	first strand
Strand 2	C	29	32	anti-parallel
Strand 3	C	289	292	parallel

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There are 3 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	67	69	first strand
Strand 2	C	90	95	parallel
Strand 3	C	111	116	parallel

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There are 3 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	175	179	first strand
Strand 2	C	202	208	parallel
Strand 3	C	245	246	parallel

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There are 2 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	367	370	first strand
Strand 2	C	384	387	anti-parallel

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There are 3 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	416	418	first strand
Strand 2	C	435	440	parallel
Strand 3	C	443	449	anti-parallel

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There are 3 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	17	19	first strand
Strand 2	D	29	32	anti-parallel
Strand 3	D	289	292	parallel

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There are 3 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	67	69	first strand
Strand 2	D	90	95	parallel
Strand 3	D	111	116	parallel

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There are 3 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	175	179	first strand
Strand 2	D	202	208	parallel
Strand 3	D	245	246	parallel

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There are 2 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	367	370	first strand
Strand 2	D	384	387	anti-parallel

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There are 3 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	416	418	first strand
Strand 2	D	435	440	parallel
Strand 3	D	443	449	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 7XNZ

Analysis of interatomic Contacts of Structural Units in PDB entry:
7XNZ