Analysis of interatomic Contacts of Structural Units in PDB entry:
7XOB

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 7XOB entry

There are 5 chains in PDB entry 7XOB (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	SER 27	ASP 1146
B	SER 27	ASP 1146
D	SER 19	ASP 615
C	SER 27	ASP 1146
E	SER 19	ASP 615

There are116 helices in PDB entry 7XOB. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	294	304	Right-handed alpha
Helix 2	AA2	A	338	343	Right-handed alpha
Helix 3	AA3	A	364	368	Right-handed 310
Helix 4	AA4	A	737	743	Right-handed alpha
Helix 5	AA5	A	746	754	Right-handed alpha
Helix 6	AA6	A	759	778	Right-handed alpha
Helix 7	AA7	A	816	824	Right-handed alpha
Helix 8	AA8	A	868	884	Right-handed alpha
Helix 9	AA9	A	886	890	Right-handed 310
Helix 10	AB1	A	897	909	Right-handed alpha
Helix 11	AB2	A	913	919	Right-handed alpha
Helix 12	AB3	A	919	941	Right-handed alpha
Helix 13	AB4	A	945	965	Right-handed alpha
Helix 14	AB5	A	976	984	Right-handed alpha
Helix 15	AB6	A	985	1033	Right-handed alpha
Helix 16	AB7	A	1141	1146	Right-handed alpha
Helix 17	AB8	B	294	304	Right-handed alpha
Helix 18	AB9	B	337	343	Right-handed alpha
Helix 19	AC1	B	365	370	Right-handed alpha
Helix 20	AC2	B	386	390	Right-handed 310
Helix 21	AC3	B	405	410	Right-handed 310
Helix 22	AC4	B	416	422	Right-handed alpha
Helix 23	AC5	B	438	443	Right-handed alpha
Helix 24	AC6	B	543	546	Right-handed 310
Helix 25	AC7	B	737	742	Right-handed alpha
Helix 26	AC8	B	746	755	Right-handed alpha
Helix 27	AC9	B	758	778	Right-handed alpha
Helix 28	AD1	B	816	824	Right-handed alpha
Helix 29	AD2	B	868	884	Right-handed alpha
Helix 30	AD3	B	886	890	Right-handed 310
Helix 31	AD4	B	897	909	Right-handed alpha
Helix 32	AD5	B	913	919	Right-handed alpha
Helix 33	AD6	B	919	941	Right-handed alpha
Helix 34	AD7	B	945	965	Right-handed alpha
Helix 35	AD8	B	966	968	Right-handed 310
Helix 36	AD9	B	977	982	Right-handed alpha
Helix 37	AE1	B	985	1033	Right-handed alpha
Helix 38	AE2	B	1141	1146	Right-handed alpha
Helix 39	AE3	D	20	53	Right-handed alpha
Helix 40	AE4	D	55	81	Right-handed alpha
Helix 41	AE5	D	90	102	Right-handed alpha
Helix 42	AE6	D	104	108	Right-handed 310
Helix 43	AE7	D	109	129	Right-handed alpha
Helix 44	AE8	D	147	155	Right-handed alpha
Helix 45	AE9	D	157	194	Right-handed alpha
Helix 46	AF1	D	198	204	Right-handed alpha
Helix 47	AF2	D	219	232	Right-handed alpha
Helix 48	AF3	D	233	252	Right-handed alpha
Helix 49	AF4	D	253	256	Right-handed 310
Helix 50	AF5	D	275	279	Right-handed 310
Helix 51	AF6	D	293	300	Right-handed alpha
Helix 52	AF7	D	303	318	Right-handed alpha
Helix 53	AF8	D	324	329	Right-handed 310
Helix 54	AF9	D	365	383	Right-handed alpha
Helix 55	AG1	D	384	388	Right-handed 310
Helix 56	AG2	D	389	393	Right-handed 310
Helix 57	AG3	D	397	413	Right-handed alpha
Helix 58	AG4	D	414	421	Right-handed alpha
Helix 59	AG5	D	431	447	Right-handed alpha
Helix 60	AG6	D	448	465	Right-handed alpha
Helix 61	AG7	D	472	484	Right-handed alpha
Helix 62	AG8	D	499	502	Right-handed 310
Helix 63	AG9	D	503	508	Right-handed alpha
Helix 64	AH1	D	513	532	Right-handed alpha
Helix 65	AH2	D	538	542	Right-handed 310
Helix 66	AH3	D	548	559	Right-handed alpha
Helix 67	AH4	D	565	574	Right-handed alpha
Helix 68	AH5	D	581	588	Right-handed alpha
Helix 69	AH6	D	588	599	Right-handed alpha
Helix 70	AH7	C	294	304	Right-handed alpha
Helix 71	AH8	C	338	343	Right-handed alpha
Helix 72	AH9	C	385	389	Right-handed 310
Helix 73	AI1	C	737	743	Right-handed alpha
Helix 74	AI2	C	746	754	Right-handed alpha
Helix 75	AI3	C	759	778	Right-handed alpha
Helix 76	AI4	C	816	824	Right-handed alpha
Helix 77	AI5	C	868	884	Right-handed alpha
Helix 78	AI6	C	886	890	Right-handed 310
Helix 79	AI7	C	897	909	Right-handed alpha
Helix 80	AI8	C	913	919	Right-handed alpha
Helix 81	AI9	C	919	941	Right-handed alpha
Helix 82	AJ1	C	945	965	Right-handed alpha
Helix 83	AJ2	C	976	984	Right-handed alpha
Helix 84	AJ3	C	985	1033	Right-handed alpha
Helix 85	AJ4	C	1141	1146	Right-handed alpha
Helix 86	AJ5	E	20	53	Right-handed alpha
Helix 87	AJ6	E	55	81	Right-handed alpha
Helix 88	AJ7	E	90	102	Right-handed alpha
Helix 89	AJ8	E	104	108	Right-handed 310
Helix 90	AJ9	E	109	129	Right-handed alpha
Helix 91	AK1	E	147	155	Right-handed alpha
Helix 92	AK2	E	157	194	Right-handed alpha
Helix 93	AK3	E	198	204	Right-handed alpha
Helix 94	AK4	E	219	232	Right-handed alpha
Helix 95	AK5	E	233	252	Right-handed alpha
Helix 96	AK6	E	253	256	Right-handed 310
Helix 97	AK7	E	275	279	Right-handed 310
Helix 98	AK8	E	293	300	Right-handed alpha
Helix 99	AK9	E	303	318	Right-handed alpha
Helix 100	AL1	E	324	329	Right-handed 310
Helix 101	AL2	E	365	383	Right-handed alpha
Helix 102	AL3	E	384	388	Right-handed 310
Helix 103	AL4	E	389	393	Right-handed 310
Helix 104	AL5	E	397	413	Right-handed alpha
Helix 105	AL6	E	414	421	Right-handed alpha
Helix 106	AL7	E	431	447	Right-handed alpha
Helix 107	AL8	E	448	465	Right-handed alpha
Helix 108	AL9	E	472	484	Right-handed alpha
Helix 109	AM1	E	499	502	Right-handed 310
Helix 110	AM2	E	503	508	Right-handed alpha
Helix 111	AM3	E	513	532	Right-handed alpha
Helix 112	AM4	E	538	542	Right-handed 310
Helix 113	AM5	E	548	559	Right-handed alpha
Helix 114	AM6	E	565	574	Right-handed alpha
Helix 115	AM7	E	581	588	Right-handed alpha
Helix 116	AM8	E	588	599	Right-handed alpha

There are 51 sheets in PDB entry 7XOB. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6, AC7, AC8, AC9, AD1, AD2, AD3, AD4, AD5, AD6, AD7, AD8, AD9, AE1, AE2, AE3, AE4, AE5, AE6, AE7, AE8, AE9, AF1, AF2, AF3, AF4, AF5, AF6,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	29	31	first strand
Strand 2	A	60	65	anti-parallel
Strand 3	A	265	267	anti-parallel

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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	47	55	first strand
Strand 2	A	271	279	anti-parallel
Strand 3	A	285	289	anti-parallel

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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	90	94	first strand
Strand 2	A	189	197	anti-parallel
Strand 3	A	200	208	anti-parallel
Strand 4	A	224	230	anti-parallel

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There are 5 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	171	172	first strand
Strand 2	A	126	132	anti-parallel
Strand 3	A	115	121	anti-parallel
Strand 4	A	101	107	anti-parallel
Strand 5	A	239	242	anti-parallel

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There are 5 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	311	314	first strand
Strand 2	A	594	599	anti-parallel
Strand 3	A	609	613	anti-parallel
Strand 4	A	648	651	anti-parallel
Strand 5	A	643	644	anti-parallel

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There are 5 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	354	358	first strand
Strand 2	A	394	402	anti-parallel
Strand 3	A	508	516	anti-parallel
Strand 4	A	431	437	anti-parallel
Strand 5	A	379	380	anti-parallel

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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	452	454	first strand
Strand 2	A	492	494	anti-parallel

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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	473	474	first strand
Strand 2	A	488	489	anti-parallel

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There are 6 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	538	543	first strand
Strand 2	A	546	554	anti-parallel
Strand 3	A	584	588	anti-parallel
Strand 4	A	573	577	anti-parallel
Strand 5	A	565	567	anti-parallel
Strand 6	C	42	43	parallel

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There are 4 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	654	655	first strand
Strand 2	A	692	696	parallel
Strand 3	A	670	674	anti-parallel
Strand 4	A	664	665	anti-parallel

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There are 2 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	701	703	first strand
Strand 2	C	787	789	parallel

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There are 4 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	712	714	first strand
Strand 2	A	1073	1078	anti-parallel
Strand 3	A	1094	1097	anti-parallel
Strand 4	A	1102	1105	anti-parallel

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There are 3 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	717	728	first strand
Strand 2	A	1059	1070	anti-parallel
Strand 3	A	1047	1056	anti-parallel

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There are 2 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	734	736	first strand
Strand 2	A	858	860	anti-parallel

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There are 2 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	788	789	first strand
Strand 2	B	702	703	parallel

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There are 4 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	1120	1122	first strand
Strand 2	A	1086	1090	anti-parallel
Strand 3	A	1081	1083	anti-parallel
Strand 4	A	1133	1134	parallel

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There are 3 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	29	31	first strand
Strand 2	B	60	65	anti-parallel
Strand 3	B	265	267	anti-parallel

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There are 6 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	42	43	first strand
Strand 2	C	565	567	parallel
Strand 3	C	573	577	anti-parallel
Strand 4	C	584	588	anti-parallel
Strand 5	C	546	554	anti-parallel
Strand 6	C	538	543	anti-parallel

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There are 3 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	47	55	first strand
Strand 2	B	271	279	anti-parallel
Strand 3	B	285	290	anti-parallel

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There are 4 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	126	132	first strand
Strand 2	B	115	121	anti-parallel
Strand 3	B	103	107	anti-parallel
Strand 4	B	239	241	anti-parallel

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There are 3 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	189	194	first strand
Strand 2	B	203	208	anti-parallel
Strand 3	B	224	225	anti-parallel

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There are 5 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	311	314	first strand
Strand 2	B	594	599	anti-parallel
Strand 3	B	609	613	anti-parallel
Strand 4	B	648	651	anti-parallel
Strand 5	B	643	645	anti-parallel

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There are 5 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	324	326	first strand
Strand 2	B	539	541	parallel
Strand 3	B	548	554	anti-parallel
Strand 4	B	584	588	anti-parallel
Strand 5	B	576	577	anti-parallel

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There are 5 strands in AC6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	354	358	first strand
Strand 2	B	394	403	anti-parallel
Strand 3	B	507	516	anti-parallel
Strand 4	B	431	437	anti-parallel
Strand 5	B	379	380	anti-parallel

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There are 2 strands in AC7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	453	454	first strand
Strand 2	B	492	493	anti-parallel

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There are 4 strands in AC8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	654	655	first strand
Strand 2	B	692	696	parallel
Strand 3	B	670	674	anti-parallel
Strand 4	B	664	667	anti-parallel

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There are 4 strands in AC9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	711	714	first strand
Strand 2	B	1073	1078	anti-parallel
Strand 3	B	1094	1097	anti-parallel
Strand 4	B	1102	1105	anti-parallel

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There are 3 strands in AD1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	717	728	first strand
Strand 2	B	1059	1070	anti-parallel
Strand 3	B	1047	1056	anti-parallel

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There are 2 strands in AD2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	733	736	first strand
Strand 2	B	858	861	anti-parallel

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There are 2 strands in AD3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	787	788	first strand
Strand 2	C	701	702	parallel

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There are 4 strands in AD4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	1120	1122	first strand
Strand 2	B	1086	1090	anti-parallel
Strand 3	B	1081	1083	anti-parallel
Strand 4	B	1133	1134	parallel

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There are 2 strands in AD5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	131	132	first strand
Strand 2	D	142	143	anti-parallel

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There are 2 strands in AD6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	262	263	first strand
Strand 2	D	487	488	parallel

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There are 2 strands in AD7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	347	350	first strand
Strand 2	D	356	359	anti-parallel

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There are 3 strands in AD8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	29	31	first strand
Strand 2	C	60	65	anti-parallel
Strand 3	C	265	267	anti-parallel

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There are 3 strands in AD9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	47	55	first strand
Strand 2	C	271	279	anti-parallel
Strand 3	C	285	289	anti-parallel

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There are 4 strands in AE1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	90	94	first strand
Strand 2	C	189	197	anti-parallel
Strand 3	C	200	208	anti-parallel
Strand 4	C	224	230	anti-parallel

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There are 5 strands in AE2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	171	172	first strand
Strand 2	C	126	132	anti-parallel
Strand 3	C	115	121	anti-parallel
Strand 4	C	101	107	anti-parallel
Strand 5	C	239	242	anti-parallel

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There are 5 strands in AE3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	311	314	first strand
Strand 2	C	594	599	anti-parallel
Strand 3	C	609	613	anti-parallel
Strand 4	C	648	651	anti-parallel
Strand 5	C	643	644	anti-parallel

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There are 5 strands in AE4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	354	358	first strand
Strand 2	C	394	402	anti-parallel
Strand 3	C	508	516	anti-parallel
Strand 4	C	431	437	anti-parallel
Strand 5	C	376	380	anti-parallel

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There are 2 strands in AE5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	391	392	first strand
Strand 2	C	524	525	anti-parallel

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There are 2 strands in AE6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	452	454	first strand
Strand 2	C	492	494	anti-parallel

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There are 2 strands in AE7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	473	474	first strand
Strand 2	C	488	489	anti-parallel

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There are 4 strands in AE8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	654	655	first strand
Strand 2	C	692	696	parallel
Strand 3	C	670	674	anti-parallel
Strand 4	C	664	665	anti-parallel

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There are 4 strands in AE9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	712	714	first strand
Strand 2	C	1073	1078	anti-parallel
Strand 3	C	1094	1097	anti-parallel
Strand 4	C	1102	1105	anti-parallel

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There are 3 strands in AF1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	717	728	first strand
Strand 2	C	1059	1070	anti-parallel
Strand 3	C	1047	1056	anti-parallel

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There are 2 strands in AF2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	734	736	first strand
Strand 2	C	858	860	anti-parallel

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There are 4 strands in AF3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	1120	1122	first strand
Strand 2	C	1086	1090	anti-parallel
Strand 3	C	1081	1083	anti-parallel
Strand 4	C	1133	1134	parallel

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There are 2 strands in AF4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	131	132	first strand
Strand 2	E	142	143	anti-parallel

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There are 2 strands in AF5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	262	263	first strand
Strand 2	E	487	488	parallel

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There are 2 strands in AF6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	347	350	first strand
Strand 2	E	356	359	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 7XOB

Analysis of interatomic Contacts of Structural Units in PDB entry:
7XOB