Analysis of interatomic Contacts of Structural Units in PDB entry:
7XOE

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 7XOE entry

There are 3 chains in PDB entry 7XOE (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	VAL 16	ASP 1143
B	VAL 16	ASP 1143
C	VAL 16	ASP 1143

There are 63 helices in PDB entry 7XOE. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	291	301	Right-handed alpha
Helix 2	AA2	A	335	340	Right-handed alpha
Helix 3	AA3	A	400	408	Right-handed 310
Helix 4	AA4	A	435	440	Right-handed alpha
Helix 5	AA5	A	735	740	Right-handed alpha
Helix 6	AA6	A	743	753	Right-handed alpha
Helix 7	AA7	A	755	780	Right-handed alpha
Helix 8	AA8	A	813	823	Right-handed alpha
Helix 9	AA9	A	847	852	Right-handed alpha
Helix 10	AB1	A	863	879	Right-handed alpha
Helix 11	AB2	A	894	907	Right-handed alpha
Helix 12	AB3	A	910	916	Right-handed alpha
Helix 13	AB4	A	916	938	Right-handed alpha
Helix 14	AB5	A	942	963	Right-handed alpha
Helix 15	AB6	A	973	979	Right-handed alpha
Helix 16	AB7	A	982	1030	Right-handed alpha
Helix 17	AB8	A	1113	1117	Right-handed 310
Helix 18	AB9	A	1138	1143	Right-handed alpha
Helix 19	AC1	B	193	197	Right-handed 310
Helix 20	AC2	B	291	301	Right-handed alpha
Helix 21	AC3	B	335	340	Right-handed alpha
Helix 22	AC4	B	364	369	Right-handed alpha
Helix 23	AC5	B	380	386	Right-handed 310
Helix 24	AC6	B	402	407	Right-handed 310
Helix 25	AC7	B	734	741	Right-handed alpha
Helix 26	AC8	B	743	753	Right-handed alpha
Helix 27	AC9	B	755	780	Right-handed alpha
Helix 28	AD1	B	813	823	Right-handed alpha
Helix 29	AD2	B	863	876	Right-handed alpha
Helix 30	AD3	B	883	888	Right-handed alpha
Helix 31	AD4	B	894	907	Right-handed alpha
Helix 32	AD5	B	910	916	Right-handed alpha
Helix 33	AD6	B	916	937	Right-handed alpha
Helix 34	AD7	B	943	963	Right-handed alpha
Helix 35	AD8	B	973	979	Right-handed alpha
Helix 36	AD9	B	982	1030	Right-handed alpha
Helix 37	AE1	B	1113	1115	Right-handed 310
Helix 38	AE2	B	1138	1143	Right-handed alpha
Helix 39	AE3	C	193	197	Right-handed 310
Helix 40	AE4	C	291	301	Right-handed alpha
Helix 41	AE5	C	334	340	Right-handed alpha
Helix 42	AE6	C	346	350	Right-handed 310
Helix 43	AE7	C	362	368	Right-handed alpha
Helix 44	AE8	C	380	387	Right-handed 310
Helix 45	AE9	C	402	407	Right-handed 310
Helix 46	AF1	C	413	419	Right-handed alpha
Helix 47	AF2	C	435	440	Right-handed alpha
Helix 48	AF3	C	499	502	Right-handed 310
Helix 49	AF4	C	734	740	Right-handed alpha
Helix 50	AF5	C	743	754	Right-handed alpha
Helix 51	AF6	C	757	780	Right-handed alpha
Helix 52	AF7	C	799	803	Right-handed 310
Helix 53	AF8	C	813	823	Right-handed alpha
Helix 54	AF9	C	846	852	Right-handed alpha
Helix 55	AG1	C	863	879	Right-handed alpha
Helix 56	AG2	C	894	907	Right-handed alpha
Helix 57	AG3	C	910	916	Right-handed alpha
Helix 58	AG4	C	916	937	Right-handed alpha
Helix 59	AG5	C	942	963	Right-handed alpha
Helix 60	AG6	C	973	979	Right-handed alpha
Helix 61	AG7	C	982	1029	Right-handed alpha
Helix 62	AG8	C	1113	1115	Right-handed 310
Helix 63	AG9	C	1138	1143	Right-handed alpha

There are 46 sheets in PDB entry 7XOE. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6, AC7, AC8, AC9, AD1, AD2, AD3, AD4, AD5, AD6, AD7, AD8, AD9, AE1, AE2, AE3, AE4, AE5, AE6, AE7, AE8, AE9, AF1,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	27	30	first strand
Strand 2	A	61	64	anti-parallel

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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	50	55	first strand
Strand 2	A	268	276	anti-parallel
Strand 3	A	282	287	anti-parallel

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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	82	83	first strand
Strand 2	A	234	235	anti-parallel

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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	89	93	first strand
Strand 2	A	261	265	anti-parallel

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There are 3 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	102	104	first strand
Strand 2	A	109	119	anti-parallel
Strand 3	A	124	126	anti-parallel

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There are 3 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	102	104	first strand
Strand 2	A	109	119	anti-parallel
Strand 3	A	129	132	anti-parallel

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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	190	191	first strand
Strand 2	A	200	201	anti-parallel

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There are 5 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	306	310	first strand
Strand 2	A	594	598	anti-parallel
Strand 3	A	606	609	anti-parallel
Strand 4	A	646	648	anti-parallel
Strand 5	A	640	641	anti-parallel

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There are 4 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	322	323	first strand
Strand 2	A	536	540	parallel
Strand 3	A	543	551	anti-parallel
Strand 4	A	582	585	anti-parallel

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There are 5 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	351	355	first strand
Strand 2	A	392	399	anti-parallel
Strand 3	A	505	512	anti-parallel
Strand 4	A	429	434	anti-parallel
Strand 5	A	373	375	anti-parallel

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There are 2 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	449	450	first strand
Strand 2	A	490	491	anti-parallel

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There are 3 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	661	664	first strand
Strand 2	A	667	672	anti-parallel
Strand 3	A	688	693	anti-parallel

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There are 2 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	700	701	first strand
Strand 2	B	786	787	parallel

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There are 3 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	715	725	first strand
Strand 2	A	1056	1066	anti-parallel
Strand 3	A	1044	1053	anti-parallel

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There are 2 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	732	733	first strand
Strand 2	A	855	856	anti-parallel

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There are 2 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	785	787	first strand
Strand 2	C	699	701	parallel

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There are 3 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	1073	1074	first strand
Strand 2	A	1091	1094	anti-parallel
Strand 3	A	1099	1102	anti-parallel

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There are 2 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	1077	1079	first strand
Strand 2	A	1129	1131	parallel

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There are 3 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	27	30	first strand
Strand 2	B	61	67	anti-parallel
Strand 3	B	260	265	anti-parallel

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There are 3 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	48	55	first strand
Strand 2	B	268	276	anti-parallel
Strand 3	B	282	286	anti-parallel

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There are 4 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	124	129	first strand
Strand 2	B	114	119	anti-parallel
Strand 3	B	101	105	anti-parallel
Strand 4	B	234	238	anti-parallel

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There are 5 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	308	315	first strand
Strand 2	B	590	596	anti-parallel
Strand 3	B	606	608	anti-parallel
Strand 4	B	646	648	anti-parallel
Strand 5	B	639	641	anti-parallel

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There are 5 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	351	355	first strand
Strand 2	B	390	400	anti-parallel
Strand 3	B	504	513	anti-parallel
Strand 4	B	428	434	anti-parallel
Strand 5	B	374	377	anti-parallel

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There are 2 strands in AC6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	449	451	first strand
Strand 2	B	489	491	anti-parallel

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There are 4 strands in AC7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	536	540	first strand
Strand 2	B	543	551	anti-parallel
Strand 3	B	581	585	anti-parallel
Strand 4	B	572	574	anti-parallel

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There are 3 strands in AC8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	661	664	first strand
Strand 2	B	667	672	anti-parallel
Strand 3	B	688	693	anti-parallel

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There are 5 strands in AC9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	708	709	first strand
Strand 2	B	1072	1074	anti-parallel
Strand 3	B	1091	1094	anti-parallel
Strand 4	B	1099	1102	anti-parallel
Strand 5	B	1110	1111	anti-parallel

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There are 3 strands in AD1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	715	719	first strand
Strand 2	B	1056	1066	anti-parallel
Strand 3	B	722	725	anti-parallel

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There are 3 strands in AD2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	715	719	first strand
Strand 2	B	1056	1066	anti-parallel
Strand 3	B	1044	1053	anti-parallel

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There are 2 strands in AD3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	731	732	first strand
Strand 2	B	856	857	anti-parallel

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There are 4 strands in AD4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	1117	1122	first strand
Strand 2	B	1083	1087	anti-parallel
Strand 3	B	1078	1079	anti-parallel
Strand 4	B	1130	1131	parallel

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There are 4 strands in AD5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	27	30	first strand
Strand 2	C	61	67	anti-parallel
Strand 3	C	260	265	anti-parallel
Strand 4	C	89	94	anti-parallel

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There are 2 strands in AD6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	36	37	first strand
Strand 2	C	219	220	parallel

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There are 3 strands in AD7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	47	55	first strand
Strand 2	C	268	276	anti-parallel
Strand 3	C	282	287	anti-parallel

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There are 5 strands in AD8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	82	83	first strand
Strand 2	C	234	237	anti-parallel
Strand 3	C	102	105	anti-parallel
Strand 4	C	114	119	anti-parallel
Strand 5	C	124	129	anti-parallel

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There are 3 strands in AD9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	154	155	first strand
Strand 2	C	138	142	anti-parallel
Strand 3	C	241	243	parallel

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There are 5 strands in AE1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	308	315	first strand
Strand 2	C	590	596	anti-parallel
Strand 3	C	606	609	anti-parallel
Strand 4	C	645	648	anti-parallel
Strand 5	C	639	642	anti-parallel

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There are 5 strands in AE2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	353	355	first strand
Strand 2	C	392	400	anti-parallel
Strand 3	C	504	511	anti-parallel
Strand 4	C	429	434	anti-parallel
Strand 5	C	374	376	anti-parallel

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There are 2 strands in AE3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	358	359	first strand
Strand 2	C	521	522	parallel

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There are 2 strands in AE4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	449	451	first strand
Strand 2	C	489	491	anti-parallel

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There are 4 strands in AE5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	536	540	first strand
Strand 2	C	543	551	anti-parallel
Strand 3	C	581	585	anti-parallel
Strand 4	C	573	574	anti-parallel

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There are 3 strands in AE6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	661	664	first strand
Strand 2	C	667	672	anti-parallel
Strand 3	C	688	693	anti-parallel

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There are 5 strands in AE7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	709	712	first strand
Strand 2	C	1069	1074	anti-parallel
Strand 3	C	1091	1094	anti-parallel
Strand 4	C	1099	1102	anti-parallel
Strand 5	C	1110	1111	anti-parallel

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There are 3 strands in AE8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	715	725	first strand
Strand 2	C	1056	1066	anti-parallel
Strand 3	C	1044	1053	anti-parallel

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There are 2 strands in AE9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	731	733	first strand
Strand 2	C	855	857	anti-parallel

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There are 3 strands in AF1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	1078	1079	first strand
Strand 2	C	1084	1087	anti-parallel
Strand 3	C	1117	1119	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 7XOE

Analysis of interatomic Contacts of Structural Units in PDB entry:
7XOE