Analysis of interatomic Contacts of Structural Units in PDB entry:
7XOF

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 7XOF entry

There are 2 chains in PDB entry 7XOF (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	SER 70	PHE 1068
B	SER 70	PRO 1066

There are 88 helices in PDB entry 7XOF. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	73	88	Right-handed alpha
Helix 2	AA2	A	102	105	Right-handed 310
Helix 3	AA3	A	106	111	Right-handed alpha
Helix 4	AA4	A	130	133	Right-handed 310
Helix 5	AA5	A	158	170	Right-handed alpha
Helix 6	AA6	A	189	192	Right-handed 310
Helix 7	AA7	A	232	240	Right-handed alpha
Helix 8	AA8	A	244	247	Right-handed 310
Helix 9	AA9	A	256	273	Right-handed alpha
Helix 10	AB1	A	276	297	Right-handed alpha
Helix 11	AB2	A	299	320	Right-handed alpha
Helix 12	AB3	A	326	353	Right-handed alpha
Helix 13	AB4	A	396	418	Right-handed alpha
Helix 14	AB5	A	506	522	Right-handed alpha
Helix 15	AB6	A	580	582	Right-handed 310
Helix 16	AB7	A	583	592	Right-handed alpha
Helix 17	AB8	A	596	614	Right-handed alpha
Helix 18	AB9	A	622	631	Right-handed alpha
Helix 19	AC1	A	644	650	Right-handed 310
Helix 20	AC2	A	651	664	Right-handed alpha
Helix 21	AC3	A	689	716	Right-handed alpha
Helix 22	AC4	A	719	724	Right-handed alpha
Helix 23	AC5	A	725	729	Right-handed 310
Helix 24	AC6	A	739	748	Right-handed alpha
Helix 25	AC7	A	749	758	Right-handed alpha
Helix 26	AC8	A	760	762	Right-handed 310
Helix 27	AC9	A	763	774	Right-handed alpha
Helix 28	AD1	A	775	779	Right-handed 310
Helix 29	AD2	A	780	786	Right-handed alpha
Helix 30	AD3	A	787	790	Right-handed 310
Helix 31	AD4	A	791	802	Right-handed alpha
Helix 32	AD5	A	804	814	Right-handed alpha
Helix 33	AD6	A	827	848	Right-handed alpha
Helix 34	AD7	A	860	875	Right-handed alpha
Helix 35	AD8	A	880	890	Right-handed alpha
Helix 36	AD9	A	897	920	Right-handed alpha
Helix 37	AE1	A	922	934	Right-handed alpha
Helix 38	AE2	A	936	951	Right-handed alpha
Helix 39	AE3	A	955	971	Right-handed alpha
Helix 40	AE4	A	982	986	Right-handed 310
Helix 41	AE5	A	988	1005	Right-handed alpha
Helix 42	AE6	A	1010	1020	Right-handed alpha
Helix 43	AE7	A	1021	1032	Right-handed alpha
Helix 44	AE8	A	1038	1054	Right-handed alpha
Helix 45	AE9	A	1061	1065	Right-handed 310
Helix 46	AF1	B	73	88	Right-handed alpha
Helix 47	AF2	B	102	105	Right-handed 310
Helix 48	AF3	B	106	111	Right-handed alpha
Helix 49	AF4	B	130	133	Right-handed 310
Helix 50	AF5	B	158	170	Right-handed alpha
Helix 51	AF6	B	232	241	Right-handed alpha
Helix 52	AF7	B	244	247	Right-handed 310
Helix 53	AF8	B	256	273	Right-handed alpha
Helix 54	AF9	B	276	297	Right-handed alpha
Helix 55	AG1	B	299	320	Right-handed alpha
Helix 56	AG2	B	326	353	Right-handed alpha
Helix 57	AG3	B	396	418	Right-handed alpha
Helix 58	AG4	B	506	522	Right-handed alpha
Helix 59	AG5	B	580	582	Right-handed 310
Helix 60	AG6	B	583	591	Right-handed alpha
Helix 61	AG7	B	596	614	Right-handed alpha
Helix 62	AG8	B	622	631	Right-handed alpha
Helix 63	AG9	B	644	650	Right-handed 310
Helix 64	AH1	B	651	664	Right-handed alpha
Helix 65	AH2	B	689	717	Right-handed alpha
Helix 66	AH3	B	719	725	Right-handed alpha
Helix 67	AH4	B	726	729	Right-handed 310
Helix 68	AH5	B	739	757	Right-handed alpha
Helix 69	AH6	B	763	772	Right-handed alpha
Helix 70	AH7	B	773	774	Right-handed 310
Helix 71	AH8	B	775	779	Right-handed 310
Helix 72	AH9	B	780	786	Right-handed alpha
Helix 73	AI1	B	787	790	Right-handed 310
Helix 74	AI2	B	791	800	Right-handed alpha
Helix 75	AI3	B	804	814	Right-handed alpha
Helix 76	AI4	B	827	848	Right-handed alpha
Helix 77	AI5	B	860	875	Right-handed alpha
Helix 78	AI6	B	880	891	Right-handed alpha
Helix 79	AI7	B	897	919	Right-handed alpha
Helix 80	AI8	B	922	934	Right-handed alpha
Helix 81	AI9	B	936	951	Right-handed alpha
Helix 82	AJ1	B	954	971	Right-handed alpha
Helix 83	AJ2	B	974	979	Right-handed alpha
Helix 84	AJ3	B	982	986	Right-handed 310
Helix 85	AJ4	B	988	1004	Right-handed alpha
Helix 86	AJ5	B	1010	1019	Right-handed alpha
Helix 87	AJ6	B	1021	1032	Right-handed alpha
Helix 88	AJ7	B	1038	1055	Right-handed alpha

There are 16 sheets in PDB entry 7XOF. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7,

There are 7 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	91	92	first strand
Strand 2	A	119	128	parallel
Strand 3	A	144	153	anti-parallel
Strand 4	A	219	231	anti-parallel
Strand 5	A	205	216	anti-parallel
Strand 6	A	193	202	anti-parallel
Strand 7	A	179	183	anti-parallel

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There are 7 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	91	92	first strand
Strand 2	A	119	128	parallel
Strand 3	A	144	153	anti-parallel
Strand 4	A	219	231	anti-parallel
Strand 5	A	205	216	anti-parallel
Strand 6	A	193	202	anti-parallel
Strand 7	A	187	188	anti-parallel

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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	249	251	first strand
Strand 2	A	254	255	anti-parallel

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There are 5 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	425	430	first strand
Strand 2	A	433	441	anti-parallel
Strand 3	A	384	392	anti-parallel
Strand 4	A	540	547	anti-parallel
Strand 5	A	550	551	anti-parallel

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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	555	556	first strand
Strand 2	A	559	560	anti-parallel

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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	564	565	first strand
Strand 2	A	576	577	anti-parallel

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There are 4 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	617	619	first strand
Strand 2	A	666	670	anti-parallel
Strand 3	A	676	685	anti-parallel
Strand 4	A	636	642	anti-parallel

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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	731	733	first strand
Strand 2	A	737	738	anti-parallel

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There are 7 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	91	92	first strand
Strand 2	B	119	128	parallel
Strand 3	B	144	153	anti-parallel
Strand 4	B	219	231	anti-parallel
Strand 5	B	205	216	anti-parallel
Strand 6	B	193	202	anti-parallel
Strand 7	B	179	183	anti-parallel

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There are 7 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	91	92	first strand
Strand 2	B	119	128	parallel
Strand 3	B	144	153	anti-parallel
Strand 4	B	219	231	anti-parallel
Strand 5	B	205	216	anti-parallel
Strand 6	B	193	202	anti-parallel
Strand 7	B	187	188	anti-parallel

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There are 2 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	249	251	first strand
Strand 2	B	254	255	anti-parallel

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There are 5 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	425	430	first strand
Strand 2	B	433	441	anti-parallel
Strand 3	B	384	392	anti-parallel
Strand 4	B	540	547	anti-parallel
Strand 5	B	550	551	anti-parallel

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There are 6 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	425	430	first strand
Strand 2	B	433	441	anti-parallel
Strand 3	B	384	392	anti-parallel
Strand 4	B	540	547	anti-parallel
Strand 5	B	559	562	parallel
Strand 6	B	555	556	anti-parallel

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There are 2 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	564	566	first strand
Strand 2	B	575	577	anti-parallel

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There are 4 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	617	619	first strand
Strand 2	B	666	670	anti-parallel
Strand 3	B	676	685	anti-parallel
Strand 4	B	636	642	anti-parallel

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There are 2 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	731	733	first strand
Strand 2	B	737	738	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 7XOF

Analysis of interatomic Contacts of Structural Units in PDB entry:
7XOF