Analysis of interatomic Contacts of Structural Units in PDB entry:
7XPC


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7XPC entry

There are 4 chains in PDB entry 7XPC (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 116CYS 452
B
 SER 77LYS 147
C
 SER 116CYS 452
D
 SER 77LYS 147
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 41 helices in PDB entry 7XPC. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
117 127Right-handed alpha
Helix 2
AA2
A
137 144Right-handed alpha
Helix 3
AA3
A
144 159Right-handed alpha
Helix 4
AA4
A
167 177Right-handed alpha
Helix 5
AA5
A
177 194Right-handed alpha
Helix 6
AA6
A
216 231Right-handed alpha
Helix 7
AA7
A
241 244Right-handed 310
Helix 8
AA8
A
246 257Right-handed alpha
Helix 9
AA9
A
260 264Right-handed 310
Helix 10
AB1
A
273 286Right-handed alpha
Helix 11
AB2
A
312 316Right-handed 310
Helix 12
AB3
A
339 347Right-handed alpha
Helix 13
AB4
A
350 358Right-handed alpha
Helix 14
AB5
A
380 396Right-handed alpha
Helix 15
AB6
A
402 427Right-handed alpha
Helix 16
AB7
A
433 435Right-handed 310
Helix 17
AB8
B
78 92Right-handed alpha
Helix 18
AB9
B
94 98Right-handed 310
Helix 19
AC1
B
108 121Right-handed alpha
Helix 20
AC2
B
123 146Right-handed alpha
Helix 21
AC3
C
117 127Right-handed alpha
Helix 22
AC4
C
137 159Right-handed alpha
Helix 23
AC5
C
167 176Right-handed alpha
Helix 24
AC6
C
177 194Right-handed alpha
Helix 25
AC7
C
216 232Right-handed alpha
Helix 26
AC8
C
239 244Right-handed 310
Helix 27
AC9
C
246 257Right-handed alpha
Helix 28
AD1
C
260 264Right-handed 310
Helix 29
AD2
C
273 285Right-handed alpha
Helix 30
AD3
C
312 316Right-handed 310
Helix 31
AD4
C
339 347Right-handed alpha
Helix 32
AD5
C
349 364Right-handed alpha
Helix 33
AD6
C
380 397Right-handed alpha
Helix 34
AD7
C
402 411Right-handed alpha
Helix 35
AD8
C
413 428Right-handed alpha
Helix 36
AD9
D
78 93Right-handed alpha
Helix 37
AE1
D
94 97Right-handed 310
Helix 38
AE2
D
98 103Right-handed alpha
Helix 39
AE3
D
105 107Right-handed 310
Helix 40
AE4
D
108 121Right-handed alpha
Helix 41
AE5
D
123 146Right-handed alpha
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There are 6 sheets in PDB entry 7XPC. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
235 239first strand
Strand 2
A
325 330parallel
Strand 3
A
205 210parallel
Strand 4
A
370 375parallel
Strand 5
A
437 441parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
294 295first strand
Strand 2
A
318 319anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
299 300first strand
Strand 2
A
309 310anti-parallel
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There are 5 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
235 238first strand
Strand 2
C
325 328parallel
Strand 3
C
205 210parallel
Strand 4
C
370 376parallel
Strand 5
C
437 442parallel
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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
293 295first strand
Strand 2
C
318 320anti-parallel
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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
299 300first strand
Strand 2
C
309 310anti-parallel
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