Analysis of interatomic Contacts of Structural Units in PDB entry:
7XQL


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7XQL entry

There are 2 chains in PDB entry 7XQL (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
B
 LYS 19SER 460
A
 LEU 17SER 460
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 47 helices in PDB entry 7XQL. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
B
20 33Right-handed alpha
Helix 2
AA2
B
36 55Right-handed alpha
Helix 3
AA3
B
60 74Right-handed alpha
Helix 4
AA4
B
77 92Right-handed alpha
Helix 5
AA5
B
96 104Right-handed alpha
Helix 6
AA6
B
111 119Right-handed alpha
Helix 7
AA7
B
121 131Right-handed alpha
Helix 8
AA8
B
136 148Right-handed alpha
Helix 9
AA9
B
149 156Right-handed alpha
Helix 10
AB1
B
161 166Right-handed 310
Helix 11
AB2
B
168 178Right-handed alpha
Helix 12
AB3
B
193 212Right-handed alpha
Helix 13
AB4
B
215 233Right-handed alpha
Helix 14
AB5
B
241 255Right-handed alpha
Helix 15
AB6
B
309 313Right-handed 310
Helix 16
AB7
B
314 323Right-handed alpha
Helix 17
AB8
B
330 342Right-handed alpha
Helix 18
AB9
B
363 383Right-handed alpha
Helix 19
AC1
B
384 388Right-handed 310
Helix 20
AC2
B
389 422Right-handed alpha
Helix 21
AC3
B
425 439Right-handed alpha
Helix 22
AC4
B
443 458Right-handed alpha
Helix 23
AC5
A
17 20Right-handed 310
Helix 24
AC6
A
21 33Right-handed alpha
Helix 25
AC7
A
36 55Right-handed alpha
Helix 26
AC8
A
60 74Right-handed alpha
Helix 27
AC9
A
77 92Right-handed alpha
Helix 28
AD1
A
96 104Right-handed alpha
Helix 29
AD2
A
111 119Right-handed alpha
Helix 30
AD3
A
121 131Right-handed alpha
Helix 31
AD4
A
136 148Right-handed alpha
Helix 32
AD5
A
149 156Right-handed alpha
Helix 33
AD6
A
161 166Right-handed 310
Helix 34
AD7
A
168 178Right-handed alpha
Helix 35
AD8
A
193 212Right-handed alpha
Helix 36
AD9
A
215 233Right-handed alpha
Helix 37
AE1
A
241 255Right-handed alpha
Helix 38
AE2
A
296 299Right-handed 310
Helix 39
AE3
A
309 313Right-handed 310
Helix 40
AE4
A
314 323Right-handed alpha
Helix 41
AE5
A
323 328Right-handed alpha
Helix 42
AE6
A
330 342Right-handed alpha
Helix 43
AE7
A
363 382Right-handed alpha
Helix 44
AE8
A
383 388Right-handed 310
Helix 45
AE9
A
389 422Right-handed alpha
Helix 46
AF1
A
425 439Right-handed alpha
Helix 47
AF2
A
443 459Right-handed alpha
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There are 5 sheets in PDB entry 7XQL. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
234 235first strand
Strand 2
B
238 239anti-parallel
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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
259 260first strand
Strand 2
B
268 276anti-parallel
Strand 3
B
263 265anti-parallel
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There are 5 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
259 260first strand
Strand 2
B
268 276anti-parallel
Strand 3
B
284 290anti-parallel
Strand 4
B
301 307anti-parallel
Strand 5
B
349 352anti-parallel
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There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
259 260first strand
Strand 2
A
268 276anti-parallel
Strand 3
A
263 265anti-parallel
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There are 5 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
259 260first strand
Strand 2
A
268 276anti-parallel
Strand 3
A
284 290anti-parallel
Strand 4
A
301 307anti-parallel
Strand 5
A
349 352anti-parallel
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