Analysis of interatomic Contacts of Structural Units in PDB entry:
7XQW

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 7XQW entry

There are 2 chains in PDB entry 7XQW (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	THR 69	PRO 858
B	ALA 23	PHE 563

There are 62 helices in PDB entry 7XQW. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	86	95	Right-handed alpha
Helix 2	AA2	A	146	164	Right-handed alpha
Helix 3	AA3	A	175	184	Right-handed alpha
Helix 4	AA4	A	210	213	Right-handed 310
Helix 5	AA5	A	217	225	Right-handed alpha
Helix 6	AA6	A	237	241	Right-handed 310
Helix 7	AA7	A	262	266	Right-handed 310
Helix 8	AA8	A	329	334	Right-handed alpha
Helix 9	AA9	A	335	339	Right-handed 310
Helix 10	AB1	A	378	395	Right-handed alpha
Helix 11	AB2	A	396	400	Right-handed 310
Helix 12	AB3	A	409	423	Right-handed alpha
Helix 13	AB4	A	431	435	Right-handed 310
Helix 14	AB5	A	437	449	Right-handed alpha
Helix 15	AB6	A	456	462	Right-handed 310
Helix 16	AB7	A	472	477	Right-handed alpha
Helix 17	AB8	A	477	491	Right-handed alpha
Helix 18	AB9	A	503	509	Right-handed 310
Helix 19	AC1	A	519	534	Right-handed alpha
Helix 20	AC2	A	538	545	Right-handed alpha
Helix 21	AC3	A	548	556	Right-handed alpha
Helix 22	AC4	A	560	568	Right-handed alpha
Helix 23	AC5	A	571	585	Right-handed alpha
Helix 24	AC6	A	593	598	Right-handed alpha
Helix 25	AC7	A	601	616	Right-handed alpha
Helix 26	AC8	A	634	641	Right-handed alpha
Helix 27	AC9	A	656	668	Right-handed alpha
Helix 28	AD1	A	678	688	Right-handed alpha
Helix 29	AD2	A	700	704	Right-handed 310
Helix 30	AD3	A	711	717	Right-handed alpha
Helix 31	AD4	A	773	785	Right-handed alpha
Helix 32	AD5	A	793	803	Right-handed alpha
Helix 33	AD6	A	812	818	Right-handed alpha
Helix 34	AD7	B	31	43	Right-handed alpha
Helix 35	AD8	B	48	50	Right-handed 310
Helix 36	AD9	B	51	63	Right-handed alpha
Helix 37	AE1	B	68	78	Right-handed alpha
Helix 38	AE2	B	81	90	Right-handed alpha
Helix 39	AE3	B	115	121	Right-handed alpha
Helix 40	AE4	B	122	134	Right-handed alpha
Helix 41	AE5	B	149	153	Right-handed 310
Helix 42	AE6	B	167	177	Right-handed alpha
Helix 43	AE7	B	189	196	Right-handed alpha
Helix 44	AE8	B	199	207	Right-handed alpha
Helix 45	AE9	B	211	223	Right-handed alpha
Helix 46	AF1	B	233	244	Right-handed alpha
Helix 47	AF2	B	262	269	Right-handed alpha
Helix 48	AF3	B	271	287	Right-handed alpha
Helix 49	AF4	B	299	311	Right-handed alpha
Helix 50	AF5	B	328	332	Right-handed 310
Helix 51	AF6	B	333	342	Right-handed alpha
Helix 52	AF7	B	370	383	Right-handed alpha
Helix 53	AF8	B	383	390	Right-handed alpha
Helix 54	AF9	B	420	427	Right-handed alpha
Helix 55	AG1	B	454	456	Right-handed 310
Helix 56	AG2	B	465	469	Right-handed 310
Helix 57	AG3	B	485	501	Right-handed alpha
Helix 58	AG4	B	505	520	Right-handed alpha
Helix 59	AG5	B	525	540	Right-handed alpha
Helix 60	AG6	B	542	549	Right-handed alpha
Helix 61	AG7	B	549	559	Right-handed alpha
Helix 62	AG8	B	560	563	Right-handed 310

There are 13 sheets in PDB entry 7XQW. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	77	78	first strand
Strand 2	A	73	74	anti-parallel
Strand 3	A	141	143	parallel
Strand 4	A	119	122	anti-parallel
Strand 5	A	129	130	anti-parallel

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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	206	208	first strand
Strand 2	A	271	273	anti-parallel

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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	233	234	first strand
Strand 2	A	243	244	anti-parallel

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There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	289	293	first strand
Strand 2	A	304	308	anti-parallel
Strand 3	A	313	318	anti-parallel

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There are 6 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	372	374	first strand
Strand 2	A	349	351	anti-parallel
Strand 3	A	737	738	anti-parallel
Strand 4	A	721	723	parallel
Strand 5	A	694	696	parallel
Strand 6	A	401	403	parallel

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There are 5 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	511	512	first strand
Strand 2	A	494	497	parallel
Strand 3	A	465	467	parallel
Strand 4	A	588	592	parallel
Strand 5	A	625	628	parallel

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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	546	547	first strand
Strand 2	A	849	850	parallel

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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	647	648	first strand
Strand 2	A	652	653	anti-parallel

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There are 3 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	749	752	first strand
Strand 2	A	757	761	anti-parallel
Strand 3	A	821	823	anti-parallel

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There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	66	67	first strand
Strand 2	B	97	98	parallel

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There are 4 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	139	144	first strand
Strand 2	B	108	113	parallel
Strand 3	B	156	158	anti-parallel
Strand 4	B	161	163	anti-parallel

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There are 4 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	319	324	first strand
Strand 2	B	290	295	parallel
Strand 3	B	249	254	parallel
Strand 4	B	365	369	parallel

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There are 5 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	411	416	first strand
Strand 2	B	398	405	anti-parallel
Strand 3	B	476	481	parallel
Strand 4	B	438	443	anti-parallel
Strand 5	B	451	452	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 7XQW

Analysis of interatomic Contacts of Structural Units in PDB entry:
7XQW