Analysis of interatomic Contacts of Structural Units in PDB entry:
7XRJ


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7XRJ entry

There is 1 chain in PDB entry 7XRJ (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ILE 2ALA 332
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 16 helices in PDB entry 7XRJ. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
15 18Right-handed 310
Helix 2
AA2
A
19 29Right-handed alpha
Helix 3
AA3
A
52 59Right-handed alpha
Helix 4
AA4
A
76 89Right-handed alpha
Helix 5
AA5
A
100 103Right-handed 310
Helix 6
AA6
A
104 115Right-handed alpha
Helix 7
AA7
A
151 167Right-handed alpha
Helix 8
AA8
A
176 184Right-handed alpha
Helix 9
AA9
A
188 192Right-handed 310
Helix 10
AB1
A
193 195Right-handed 310
Helix 11
AB2
A
196 205Right-handed alpha
Helix 12
AB3
A
227 238Right-handed alpha
Helix 13
AB4
A
264 280Right-handed alpha
Helix 14
AB5
A
296 312Right-handed alpha
Helix 15
AB6
A
317 322Right-handed alpha
Helix 16
AB7
A
323 331Right-handed alpha
Back to top of page

There are 2 sheets in PDB entry 7XRJ. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
33 38first strand
Strand 2
A
6 11parallel
Strand 3
A
63 66parallel
Strand 4
A
92 95parallel
Strand 5
A
118 120parallel
Back to list of sheets
Back to top of page

There are 6 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
170 173first strand
Strand 2
A
213 216parallel
Strand 3
A
139 145parallel
Strand 4
A
242 247parallel
Strand 5
A
284 290parallel
Strand 6
A
315 316parallel
Back to list of sheets
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il