Analysis of interatomic Contacts of Structural Units in PDB entry:
7XS0


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7XS0 entry

There are 2 chains in PDB entry 7XS0 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 HIS -5VAL 474
B
 UNK 1UNK 3
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 8 helices in PDB entry 7XS0. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
-5 -1Right-handed 310
Helix 2
AA2
A
44 53Right-handed alpha
Helix 3
AA3
A
114 119Right-handed alpha
Helix 4
AA4
A
255 267Right-handed alpha
Helix 5
AA5
A
306 312Right-handed alpha
Helix 6
AA6
A
329 339Right-handed alpha
Helix 7
AA7
A
396 400Right-handed 310
Helix 8
AA8
A
442 452Right-handed alpha
Back to top of page

There are 6 sheets in PDB entry 7XS0. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6,

There are 7 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
55 59first strand
Strand 2
A
98 104anti-parallel
Strand 3
A
110 113anti-parallel
Strand 4
A
148 152anti-parallel
Strand 5
A
134 143anti-parallel
Strand 6
A
124 127anti-parallel
Strand 7
A
55 59anti-parallel
Back to list of sheets
Back to top of page

There are 7 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
174 179first strand
Strand 2
A
187 197anti-parallel
Strand 3
A
209 212anti-parallel
Strand 4
A
251 254anti-parallel
Strand 5
A
232 237anti-parallel
Strand 6
A
224 227anti-parallel
Strand 7
A
174 179anti-parallel
Back to list of sheets
Back to top of page

There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
278 281first strand
Strand 2
A
297 302anti-parallel
Strand 3
A
318 322anti-parallel
Strand 4
A
325 326anti-parallel
Back to list of sheets
Back to top of page

There are 5 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
278 281first strand
Strand 2
A
297 302anti-parallel
Strand 3
A
318 322anti-parallel
Strand 4
A
345 351anti-parallel
Strand 5
A
356 362anti-parallel
Back to list of sheets
Back to top of page

There are 3 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
410 411first strand
Strand 2
A
431 435anti-parallel
Strand 3
A
438 439anti-parallel
Back to list of sheets
Back to top of page

There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
410 411first strand
Strand 2
A
431 435anti-parallel
Strand 3
A
458 463anti-parallel
Strand 4
A
470 474anti-parallel
Back to list of sheets
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il