Analysis of interatomic Contacts of Structural Units in PDB entry:
7XS6

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 7XS6 entry

There are 2 chains in PDB entry 7XS6 (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
B	PHE 378	ARG 1131
A	PHE 378	ARG 1131

There are 62 helices in PDB entry 7XS6. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	B	392	403	Right-handed alpha
Helix 2	AA2	B	424	428	Right-handed 310
Helix 3	AA3	B	458	479	Right-handed alpha
Helix 4	AA4	B	488	491	Right-handed 310
Helix 5	AA5	B	506	516	Right-handed alpha
Helix 6	AA6	B	578	587	Right-handed alpha
Helix 7	AA7	B	588	594	Right-handed alpha
Helix 8	AA8	B	610	617	Right-handed alpha
Helix 9	AA9	B	618	620	Right-handed 310
Helix 10	AB1	B	636	643	Right-handed 310
Helix 11	AB2	B	644	661	Right-handed alpha
Helix 12	AB3	B	661	669	Right-handed alpha
Helix 13	AB4	B	683	687	Right-handed alpha
Helix 14	AB5	B	688	696	Right-handed alpha
Helix 15	AB6	B	706	711	Right-handed alpha
Helix 16	AB7	B	712	715	Right-handed 310
Helix 17	AB8	B	717	726	Right-handed alpha
Helix 18	AB9	B	749	774	Right-handed alpha
Helix 19	AC1	B	775	778	Right-handed 310
Helix 20	AC2	B	784	807	Right-handed alpha
Helix 21	AC3	B	807	828	Right-handed alpha
Helix 22	AC4	B	830	855	Right-handed alpha
Helix 23	AC5	B	861	895	Right-handed alpha
Helix 24	AC6	B	921	932	Right-handed alpha
Helix 25	AC7	B	936	941	Right-handed alpha
Helix 26	AC8	B	942	954	Right-handed alpha
Helix 27	AC9	B	954	963	Right-handed alpha
Helix 28	AD1	B	997	1012	Right-handed alpha
Helix 29	AD2	B	1028	1059	Right-handed alpha
Helix 30	AD3	B	1063	1075	Right-handed alpha
Helix 31	AD4	B	1091	1130	Right-handed alpha
Helix 32	AD5	A	392	403	Right-handed alpha
Helix 33	AD6	A	424	428	Right-handed 310
Helix 34	AD7	A	458	479	Right-handed alpha
Helix 35	AD8	A	488	491	Right-handed 310
Helix 36	AD9	A	506	516	Right-handed alpha
Helix 37	AE1	A	578	587	Right-handed alpha
Helix 38	AE2	A	588	594	Right-handed alpha
Helix 39	AE3	A	610	617	Right-handed alpha
Helix 40	AE4	A	618	620	Right-handed 310
Helix 41	AE5	A	636	643	Right-handed 310
Helix 42	AE6	A	644	658	Right-handed alpha
Helix 43	AE7	A	661	669	Right-handed alpha
Helix 44	AE8	A	683	687	Right-handed alpha
Helix 45	AE9	A	688	696	Right-handed alpha
Helix 46	AF1	A	706	711	Right-handed alpha
Helix 47	AF2	A	712	715	Right-handed 310
Helix 48	AF3	A	718	726	Right-handed alpha
Helix 49	AF4	A	749	774	Right-handed alpha
Helix 50	AF5	A	775	778	Right-handed 310
Helix 51	AF6	A	784	807	Right-handed alpha
Helix 52	AF7	A	807	828	Right-handed alpha
Helix 53	AF8	A	830	855	Right-handed alpha
Helix 54	AF9	A	861	895	Right-handed alpha
Helix 55	AG1	A	921	932	Right-handed alpha
Helix 56	AG2	A	936	941	Right-handed alpha
Helix 57	AG3	A	942	954	Right-handed alpha
Helix 58	AG4	A	954	963	Right-handed alpha
Helix 59	AG5	A	997	1012	Right-handed alpha
Helix 60	AG6	A	1028	1059	Right-handed alpha
Helix 61	AG7	A	1063	1075	Right-handed alpha
Helix 62	AG8	A	1091	1130	Right-handed alpha

There are 9 sheets in PDB entry 7XS6. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9,

There are 11 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	385	390	first strand
Strand 2	B	415	421	anti-parallel
Strand 3	B	535	542	anti-parallel
Strand 4	B	565	567	anti-parallel
Strand 5	B	493	499	parallel
Strand 6	B	448	454	parallel
Strand 7	B	597	602	parallel
Strand 8	B	678	682	anti-parallel
Strand 9	B	624	633	anti-parallel
Strand 10	B	733	744	parallel
Strand 11	B	606	607	anti-parallel

Back to list of sheets
Back to top of page

There are 11 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	385	390	first strand
Strand 2	B	415	421	anti-parallel
Strand 3	B	535	542	anti-parallel
Strand 4	B	570	572	anti-parallel
Strand 5	B	493	499	parallel
Strand 6	B	448	454	parallel
Strand 7	B	597	602	parallel
Strand 8	B	678	682	anti-parallel
Strand 9	B	624	633	anti-parallel
Strand 10	B	733	744	parallel
Strand 11	B	606	607	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	527	528	first strand
Strand 2	A	981	982	parallel

Back to list of sheets
Back to top of page

There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	545	549	first strand
Strand 2	B	554	557	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	981	982	first strand
Strand 2	A	527	528	parallel

Back to list of sheets
Back to top of page

There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	1086	1088	first strand
Strand 2	A	1086	1088	anti-parallel

Back to list of sheets
Back to top of page

There are 11 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	385	390	first strand
Strand 2	A	415	421	anti-parallel
Strand 3	A	535	542	anti-parallel
Strand 4	A	565	567	anti-parallel
Strand 5	A	493	499	parallel
Strand 6	A	448	454	parallel
Strand 7	A	597	602	parallel
Strand 8	A	678	682	anti-parallel
Strand 9	A	624	633	anti-parallel
Strand 10	A	733	744	parallel
Strand 11	A	606	607	anti-parallel

Back to list of sheets
Back to top of page

There are 11 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	385	390	first strand
Strand 2	A	415	421	anti-parallel
Strand 3	A	535	542	anti-parallel
Strand 4	A	570	572	anti-parallel
Strand 5	A	493	499	parallel
Strand 6	A	448	454	parallel
Strand 7	A	597	602	parallel
Strand 8	A	678	682	anti-parallel
Strand 9	A	624	633	anti-parallel
Strand 10	A	733	744	parallel
Strand 11	A	606	607	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	545	549	first strand
Strand 2	A	554	557	anti-parallel

Back to list of sheets
Back to top of page

Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 7XS6

Analysis of interatomic Contacts of Structural Units in PDB entry:
7XS6