Analysis of interatomic Contacts of Structural Units in PDB entry:
7XSJ


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7XSJ entry

There are 3 chains in PDB entry 7XSJ (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ILE 4SER 594
B
 PHE 29ALA 247
C
 GLU 266SER 283
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 38 helices in PDB entry 7XSJ. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
5 18Right-handed alpha
Helix 2
AA2
A
34 45Right-handed alpha
Helix 3
AA3
A
46 52Right-handed alpha
Helix 4
AA4
A
80 90Right-handed alpha
Helix 5
AA5
A
111 119Right-handed alpha
Helix 6
AA6
A
121 125Right-handed 310
Helix 7
AA7
A
153 158Right-handed alpha
Helix 8
AA8
A
159 162Right-handed 310
Helix 9
AA9
A
165 183Right-handed alpha
Helix 10
AB1
A
195 216Right-handed alpha
Helix 11
AB2
A
236 238Right-handed 310
Helix 12
AB3
A
240 244Right-handed 310
Helix 13
AB4
A
248 257Right-handed alpha
Helix 14
AB5
A
285 290Right-handed alpha
Helix 15
AB6
A
295 314Right-handed alpha
Helix 16
AB7
A
326 334Right-handed alpha
Helix 17
AB8
A
337 357Right-handed alpha
Helix 18
AB9
A
360 375Right-handed alpha
Helix 19
AC1
A
385 396Right-handed alpha
Helix 20
AC2
A
400 414Right-handed alpha
Helix 21
AC3
A
415 417Right-handed 310
Helix 22
AC4
A
419 431Right-handed alpha
Helix 23
AC5
A
433 443Right-handed alpha
Helix 24
AC6
A
444 447Right-handed 310
Helix 25
AC7
A
480 491Right-handed alpha
Helix 26
AC8
A
547 561Right-handed alpha
Helix 27
AC9
A
574 584Right-handed alpha
Helix 28
AD1
A
588 593Right-handed alpha
Helix 29
AD2
B
30 63Right-handed alpha
Helix 30
AD3
B
68 106Right-handed alpha
Helix 31
AD4
B
110 157Right-handed alpha
Helix 32
AD5
B
161 172Right-handed alpha
Helix 33
AD6
B
176 181Right-handed alpha
Helix 34
AD7
B
185 212Right-handed alpha
Helix 35
AD8
B
212 227Right-handed alpha
Helix 36
AD9
B
228 231Right-handed 310
Helix 37
AE1
B
232 238Right-handed alpha
Helix 38
AE2
C
270 283Right-handed alpha
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There are 4 sheets in PDB entry 7XSJ. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
55 60first strand
Strand 2
A
29 33parallel
Strand 3
A
72 77parallel
Strand 4
A
102 106parallel
Strand 5
A
127 132parallel
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There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
144 146first strand
Strand 2
A
565 569parallel
Strand 3
A
537 542parallel
Strand 4
A
229 234parallel
Strand 5
A
188 191parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
263 269first strand
Strand 2
A
274 280anti-parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
545 546first strand
Strand 2
A
572 573parallel
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