Analysis of interatomic Contacts of Structural Units in PDB entry:
7XTL


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7XTL entry

There are 2 chains in PDB entry 7XTL (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LYS 387THR 534
B
 VAL 390THR 534
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 6 helices in PDB entry 7XTL. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
407 414Right-handed alpha
Helix 2
AA2
A
474 479Right-handed alpha
Helix 3
AA3
A
502 506Right-handed 310
Helix 4
AA4
B
407 413Right-handed alpha
Helix 5
AA5
B
474 479Right-handed alpha
Helix 6
AA6
B
502 506Right-handed 310
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There are 4 sheets in PDB entry 7XTL. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
394 398first strand
Strand 2
A
428 446anti-parallel
Strand 3
A
508 515anti-parallel
Strand 4
A
459 465anti-parallel
Strand 5
A
487 491anti-parallel
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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
418 420first strand
Strand 2
A
523 534anti-parallel
Strand 3
A
428 446anti-parallel
Strand 4
A
496 500anti-parallel
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There are 5 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
394 398first strand
Strand 2
B
428 437anti-parallel
Strand 3
B
508 515anti-parallel
Strand 4
B
459 465anti-parallel
Strand 5
B
487 491anti-parallel
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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
418 420first strand
Strand 2
B
523 532anti-parallel
Strand 3
B
439 446anti-parallel
Strand 4
B
496 500anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il