Analysis of interatomic Contacts of Structural Units in PDB entry:
7XUF

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 7XUF entry

There are 4 chains in PDB entry 7XUF (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	SER 54	GLY 529
B	ASP 54	ASN 509
C	SER 54	GLY 529
D	ASP 54	ASN 509

There are 91 helices in PDB entry 7XUF. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	85	87	Right-handed 310
Helix 2	AA2	A	88	101	Right-handed alpha
Helix 3	AA3	A	102	110	Right-handed alpha
Helix 4	AA4	A	116	136	Right-handed alpha
Helix 5	AA5	A	152	161	Right-handed alpha
Helix 6	AA6	A	163	173	Right-handed alpha
Helix 7	AA7	A	176	181	Right-handed alpha
Helix 8	AA8	A	194	203	Right-handed 310
Helix 9	AA9	A	204	214	Right-handed alpha
Helix 10	AB1	A	230	251	Right-handed alpha
Helix 11	AB2	A	271	287	Right-handed alpha
Helix 12	AB3	A	288	290	Right-handed 310
Helix 13	AB4	A	302	312	Right-handed alpha
Helix 14	AB5	A	313	318	Right-handed alpha
Helix 15	AB6	A	320	330	Right-handed alpha
Helix 16	AB7	A	333	352	Right-handed alpha
Helix 17	AB8	A	355	377	Right-handed alpha
Helix 18	AB9	A	385	403	Right-handed alpha
Helix 19	AC1	A	411	419	Right-handed alpha
Helix 20	AC2	A	474	481	Right-handed alpha
Helix 21	AC3	A	501	511	Right-handed alpha
Helix 22	AC4	A	517	529	Right-handed alpha
Helix 23	AC5	B	55	64	Right-handed alpha
Helix 24	AC6	B	65	82	Right-handed alpha
Helix 25	AC7	B	86	90	Right-handed 310
Helix 26	AC8	B	91	106	Right-handed alpha
Helix 27	AC9	B	124	142	Right-handed alpha
Helix 28	AD1	B	145	150	Right-handed alpha
Helix 29	AD2	B	151	154	Right-handed 310
Helix 30	AD3	B	155	161	Right-handed alpha
Helix 31	AD4	B	162	167	Right-handed 310
Helix 32	AD5	B	168	178	Right-handed alpha
Helix 33	AD6	B	190	215	Right-handed alpha
Helix 34	AD7	B	238	252	Right-handed alpha
Helix 35	AD8	B	263	294	Right-handed alpha
Helix 36	AD9	B	297	317	Right-handed alpha
Helix 37	AE1	B	319	336	Right-handed alpha
Helix 38	AE2	B	342	350	Right-handed 310
Helix 39	AE3	B	351	357	Right-handed alpha
Helix 40	AE4	B	363	369	Right-handed alpha
Helix 41	AE5	B	378	385	Right-handed alpha
Helix 42	AE6	B	440	445	Right-handed alpha
Helix 43	AE7	B	467	477	Right-handed alpha
Helix 44	AE8	B	480	491	Right-handed alpha
Helix 45	AE9	B	496	502	Right-handed alpha
Helix 46	AF1	B	504	509	Right-handed alpha
Helix 47	AF2	C	89	101	Right-handed alpha
Helix 48	AF3	C	101	110	Right-handed alpha
Helix 49	AF4	C	116	136	Right-handed alpha
Helix 50	AF5	C	152	162	Right-handed alpha
Helix 51	AF6	C	163	172	Right-handed alpha
Helix 52	AF7	C	175	184	Right-handed alpha
Helix 53	AF8	C	194	203	Right-handed 310
Helix 54	AF9	C	204	214	Right-handed alpha
Helix 55	AG1	C	227	230	Right-handed 310
Helix 56	AG2	C	231	251	Right-handed alpha
Helix 57	AG3	C	271	287	Right-handed alpha
Helix 58	AG4	C	288	290	Right-handed 310
Helix 59	AG5	C	302	313	Right-handed alpha
Helix 60	AG6	C	313	331	Right-handed alpha
Helix 61	AG7	C	333	352	Right-handed alpha
Helix 62	AG8	C	355	377	Right-handed alpha
Helix 63	AG9	C	385	403	Right-handed alpha
Helix 64	AH1	C	411	420	Right-handed alpha
Helix 65	AH2	C	474	481	Right-handed alpha
Helix 66	AH3	C	501	510	Right-handed alpha
Helix 67	AH4	C	517	529	Right-handed alpha
Helix 68	AH5	D	55	82	Right-handed alpha
Helix 69	AH6	D	86	90	Right-handed 310
Helix 70	AH7	D	91	106	Right-handed alpha
Helix 71	AH8	D	123	132	Right-handed alpha
Helix 72	AH9	D	135	142	Right-handed alpha
Helix 73	AI1	D	145	150	Right-handed alpha
Helix 74	AI2	D	156	161	Right-handed alpha
Helix 75	AI3	D	163	167	Right-handed 310
Helix 76	AI4	D	168	173	Right-handed alpha
Helix 77	AI5	D	190	216	Right-handed alpha
Helix 78	AI6	D	238	252	Right-handed alpha
Helix 79	AI7	D	263	281	Right-handed alpha
Helix 80	AI8	D	284	294	Right-handed alpha
Helix 81	AI9	D	297	316	Right-handed alpha
Helix 82	AJ1	D	319	321	Right-handed 310
Helix 83	AJ2	D	322	336	Right-handed alpha
Helix 84	AJ3	D	343	348	Right-handed alpha
Helix 85	AJ4	D	351	359	Right-handed alpha
Helix 86	AJ5	D	359	369	Right-handed alpha
Helix 87	AJ6	D	378	386	Right-handed alpha
Helix 88	AJ7	D	441	446	Right-handed alpha
Helix 89	AJ8	D	467	477	Right-handed alpha
Helix 90	AJ9	D	481	492	Right-handed alpha
Helix 91	AK1	D	498	508	Right-handed alpha

There are 10 sheets in PDB entry 7XUF. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	141	142	first strand
Strand 2	A	149	150	anti-parallel

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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	424	427	first strand
Strand 2	A	494	498	anti-parallel
Strand 3	A	444	446	anti-parallel
Strand 4	A	472	473	anti-parallel

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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	432	434	first strand
Strand 2	A	487	490	anti-parallel
Strand 3	A	451	454	anti-parallel

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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	389	393	first strand
Strand 2	B	460	466	anti-parallel
Strand 3	B	408	414	anti-parallel
Strand 4	B	438	439	anti-parallel

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There are 3 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	431	434	first strand
Strand 2	B	416	420	anti-parallel
Strand 3	B	453	456	anti-parallel

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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	141	142	first strand
Strand 2	C	149	150	anti-parallel

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There are 3 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	432	434	first strand
Strand 2	C	487	490	anti-parallel
Strand 3	C	451	454	anti-parallel

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There are 3 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	472	473	first strand
Strand 2	C	444	446	anti-parallel
Strand 3	C	496	498	anti-parallel

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There are 4 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	389	393	first strand
Strand 2	D	460	466	anti-parallel
Strand 3	D	408	414	anti-parallel
Strand 4	D	438	439	anti-parallel

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There are 4 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	398	400	first strand
Strand 2	D	453	456	anti-parallel
Strand 3	D	417	422	anti-parallel
Strand 4	D	427	433	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 7XUF

Analysis of interatomic Contacts of Structural Units in PDB entry:
7XUF