Analysis of interatomic Contacts of Structural Units in PDB entry:
7XVE


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7XVE entry

There are 3 chains in PDB entry 7XVE (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLY 8GLU 1768
B
 GLY 20ALA 192
C
 SER 29MET 148
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 65 helices in PDB entry 7XVE. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
16 34Right-handed alpha
Helix 2
AA2
A
60 64Right-handed 310
Helix 3
AA3
A
79 85Right-handed alpha
Helix 4
AA4
A
104 108Right-handed 310
Helix 5
AA5
A
113 124Right-handed alpha
Helix 6
AA6
A
125 144Right-handed alpha
Helix 7
AA7
A
149 152Right-handed 310
Helix 8
AA8
A
153 175Right-handed alpha
Helix 9
AA9
A
186 203Right-handed alpha
Helix 10
AB1
A
212 215Right-handed 310
Helix 11
AB2
A
216 223Right-handed alpha
Helix 12
AB3
A
231 245Right-handed alpha
Helix 13
AB4
A
245 268Right-handed alpha
Helix 14
AB5
A
269 271Right-handed 310
Helix 15
AB6
A
295 300Right-handed alpha
Helix 16
AB7
A
346 359Right-handed alpha
Helix 17
AB8
A
362 375Right-handed alpha
Helix 18
AB9
A
378 427Right-handed alpha
Helix 19
AC1
A
727 741Right-handed alpha
Helix 20
AC2
A
746 763Right-handed alpha
Helix 21
AC3
A
769 798Right-handed alpha
Helix 22
AC4
A
799 805Right-handed alpha
Helix 23
AC5
A
808 824Right-handed alpha
Helix 24
AC6
A
830 835Right-handed 310
Helix 25
AC7
A
836 848Right-handed 310
Helix 26
AC8
A
849 888Right-handed alpha
Helix 27
AC9
A
888 895Right-handed alpha
Helix 28
AD1
A
896 899Right-handed 310
Helix 29
AD2
A
912 925Right-handed alpha
Helix 30
AD3
A
928 940Right-handed alpha
Helix 31
AD4
A
941 957Right-handed alpha
Helix 32
AD5
A
958 971Right-handed alpha
Helix 33
AD6
A
986 1014Right-handed alpha
Helix 34
AD7
A
1176 1191Right-handed alpha
Helix 35
AD8
A
1191 1210Right-handed alpha
Helix 36
AD9
A
1219 1248Right-handed alpha
Helix 37
AE1
A
1249 1255Right-handed alpha
Helix 38
AE2
A
1256 1278Right-handed alpha
Helix 39
AE3
A
1285 1292Right-handed alpha
Helix 40
AE4
A
1293 1297Right-handed 310
Helix 41
AE5
A
1298 1304Right-handed alpha
Helix 42
AE6
A
1304 1344Right-handed alpha
Helix 43
AE7
A
1366 1377Right-handed alpha
Helix 44
AE8
A
1391 1405Right-handed alpha
Helix 45
AE9
A
1407 1418Right-handed alpha
Helix 46
AF1
A
1430 1432Right-handed 310
Helix 47
AF2
A
1433 1445Right-handed alpha
Helix 48
AF3
A
1447 1468Right-handed alpha
Helix 49
AF4
A
1475 1490Right-handed alpha
Helix 50
AF5
A
1502 1513Right-handed alpha
Helix 51
AF6
A
1514 1534Right-handed alpha
Helix 52
AF7
A
1540 1569Right-handed alpha
Helix 53
AF8
A
1570 1574Right-handed 310
Helix 54
AF9
A
1576 1597Right-handed alpha
Helix 55
AG1
A
1605 1613Right-handed alpha
Helix 56
AG2
A
1614 1623Right-handed 310
Helix 57
AG3
A
1627 1666Right-handed alpha
Helix 58
AG4
A
1683 1695Right-handed alpha
Helix 59
AG5
A
1699 1705Right-handed alpha
Helix 60
AG6
A
1706 1709Right-handed 310
Helix 61
AG7
A
1732 1751Right-handed alpha
Helix 62
AG8
A
1751 1768Right-handed alpha
Helix 63
AG9
B
153 192Right-handed alpha
Helix 64
AH1
C
104 108Right-handed 310
Helix 65
AH2
C
118 122Right-handed 310
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There are 8 sheets in PDB entry 7XVE. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
87 91first strand
Strand 2
A
97 101anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
273 277first strand
Strand 2
A
328 332anti-parallel
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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1357 1358first strand
Strand 2
A
1349 1352anti-parallel
Strand 3
A
1380 1383anti-parallel
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There are 6 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
29 31first strand
Strand 2
B
133 147parallel
Strand 3
B
117 128anti-parallel
Strand 4
B
50 61anti-parallel
Strand 5
B
68 73anti-parallel
Strand 6
B
78 80anti-parallel
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There are 3 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
36 38first strand
Strand 2
B
106 108anti-parallel
Strand 3
B
90 92anti-parallel
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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
31 33first strand
Strand 2
C
51 53anti-parallel
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There are 6 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
37 41first strand
Strand 2
C
141 147parallel
Strand 3
C
123 130anti-parallel
Strand 4
C
64 70anti-parallel
Strand 5
C
78 84anti-parallel
Strand 6
C
87 89anti-parallel
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There are 3 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
44 48first strand
Strand 2
C
112 117anti-parallel
Strand 3
C
99 101anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il