Analysis of interatomic Contacts of Structural Units in PDB entry:
7XVG


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7XVG entry

There are 2 chains in PDB entry 7XVG (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 TYR 434SER 888
B
 SER 142VAL 557
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 35 helices in PDB entry 7XVG. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
434 438Right-handed 310
Helix 2
AA2
A
446 457Right-handed alpha
Helix 3
AA3
A
469 482Right-handed alpha
Helix 4
AA4
A
502 514Right-handed alpha
Helix 5
AA5
A
594 598Right-handed 310
Helix 6
AA6
A
615 621Right-handed 310
Helix 7
AA7
A
661 665Right-handed 310
Helix 8
AA8
A
680 687Right-handed alpha
Helix 9
AA9
A
688 690Right-handed 310
Helix 10
AB1
A
707 718Right-handed alpha
Helix 11
AB2
A
786 792Right-handed alpha
Helix 12
AB3
A
804 810Right-handed alpha
Helix 13
AB4
A
840 844Right-handed 310
Helix 14
AB5
A
860 864Right-handed 310
Helix 15
AB6
B
143 150Right-handed alpha
Helix 16
AB7
B
183 193Right-handed alpha
Helix 17
AB8
B
194 199Right-handed alpha
Helix 18
AB9
B
211 226Right-handed alpha
Helix 19
AC1
B
229 244Right-handed alpha
Helix 20
AC2
B
255 275Right-handed alpha
Helix 21
AC3
B
280 289Right-handed alpha
Helix 22
AC4
B
290 317Right-handed alpha
Helix 23
AC5
B
318 322Right-handed 310
Helix 24
AC6
B
323 330Right-handed 310
Helix 25
AC7
B
331 335Right-handed 310
Helix 26
AC8
B
336 347Right-handed alpha
Helix 27
AC9
B
347 365Right-handed alpha
Helix 28
AD1
B
379 392Right-handed alpha
Helix 29
AD2
B
393 396Right-handed 310
Helix 30
AD3
B
403 419Right-handed alpha
Helix 31
AD4
B
423 441Right-handed alpha
Helix 32
AD5
B
447 455Right-handed alpha
Helix 33
AD6
B
455 483Right-handed alpha
Helix 34
AD7
B
508 529Right-handed alpha
Helix 35
AD8
B
540 553Right-handed alpha
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There are 5 sheets in PDB entry 7XVG. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
444 445first strand
Strand 2
A
496 501anti-parallel
Strand 3
A
485 490anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
581 583first strand
Strand 2
A
603 605parallel
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There are 5 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
626 628first strand
Strand 2
A
649 651parallel
Strand 3
A
670 674parallel
Strand 4
A
696 699parallel
Strand 5
A
725 727parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
799 802first strand
Strand 2
A
831 834parallel
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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
856 859first strand
Strand 2
A
881 884parallel
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