Analysis of interatomic Contacts of Structural Units in PDB entry:
7XVY


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7XVY entry

There are 4 chains in PDB entry 7XVY (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LEU 263HIS 498
B
 LEU 263ALA 497
C
 SER 603THR 613
D
 HIS 604THR 613
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 23 helices in PDB entry 7XVY. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
264 276Right-handed alpha
Helix 2
AA2
A
292 316Right-handed alpha
Helix 3
AA3
A
318 322Right-handed 310
Helix 4
AA4
A
323 348Right-handed alpha
Helix 5
AA5
A
363 368Right-handed alpha
Helix 6
AA6
A
372 390Right-handed alpha
Helix 7
AA7
A
393 407Right-handed alpha
Helix 8
AA8
A
422 443Right-handed alpha
Helix 9
AA9
A
447 482Right-handed alpha
Helix 10
AB1
A
488 497Right-handed alpha
Helix 11
AB2
B
264 276Right-handed alpha
Helix 12
AB3
B
290 315Right-handed alpha
Helix 13
AB4
B
318 322Right-handed 310
Helix 14
AB5
B
323 347Right-handed alpha
Helix 15
AB6
B
365 370Right-handed 310
Helix 16
AB7
B
372 390Right-handed alpha
Helix 17
AB8
B
393 407Right-handed alpha
Helix 18
AB9
B
422 444Right-handed alpha
Helix 19
AC1
B
447 461Right-handed alpha
Helix 20
AC2
B
461 482Right-handed alpha
Helix 21
AC3
B
488 497Right-handed alpha
Helix 22
AC4
C
604 612Right-handed alpha
Helix 23
AC5
D
605 612Right-handed alpha
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There are 2 sheets in PDB entry 7XVY. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
354 357first strand
Strand 2
A
360 362anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
353 357first strand
Strand 2
B
360 363anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il