Analysis of interatomic Contacts of Structural Units in PDB entry:
7XW2


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7XW2 entry

There are 2 chains in PDB entry 7XW2 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
ARG 739LEU 1912
C
U 1 U 73
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 27 helices in PDB entry 7XW2. Click on helix of interest for CSU analysis.
Helix
number
Helix
ID
Chain
ID
Initial
residue
Terminal
residue
Helix class
Helix 1
AA1
A
754 758Right-handed 310
Helix 2
AA2
A
839 855Right-handed alpha
Helix 3
AA3
A
968 976Right-handed alpha
Helix 4
AA4
A
1017 1028Right-handed alpha
Helix 5
AA5
A
1045 1053Right-handed alpha
Helix 6
AA6
A
1053 1061Right-handed alpha
Helix 7
AA7
A
1068 1074Right-handed alpha
Helix 8
AA8
A
1293 1298Right-handed alpha
Helix 9
AA9
A
1315 1335Right-handed alpha
Helix 10
AB1
A
1339 1351Right-handed alpha
Helix 11
AB2
A
1352 1364Right-handed alpha
Helix 12
AB3
A
1364 1369Right-handed alpha
Helix 13
AB4
A
1375 1380Right-handed alpha
Helix 14
AB5
A
1555 1575Right-handed alpha
Helix 15
AB6
A
1577 1587Right-handed alpha
Helix 16
AB7
A
1665 1674Right-handed alpha
Helix 17
AB8
A
1680 1686Right-handed alpha
Helix 18
AB9
A
1701 1722Right-handed alpha
Helix 19
AC1
A
1728 1741Right-handed alpha
Helix 20
AC2
A
1741 1752Right-handed alpha
Helix 21
AC3
A
1754 1758Right-handed 310
Helix 22
AC4
A
1764 1777Right-handed alpha
Helix 23
AC5
A
1805 1812Right-handed alpha
Helix 24
AC6
A
1813 1823Right-handed alpha
Helix 25
AC7
A
1826 1849Right-handed alpha
Helix 26
AC8
A
1852 1861Right-handed alpha
Helix 27
AC9
A
1896 1912Right-handed alpha
Back to top of page

There are 8 sheets in PDB entry 7XW2. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
747 750first strand
Strand 2
A
1551 1554anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
769 770first strand
Strand 2
A
833 834anti-parallel
Back to list of sheets
Back to top of page

There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
801 804first strand
Strand 2
A
878 882anti-parallel
Strand 3
A
891 892anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
816 820first strand
Strand 2
A
823 827anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
866 867first strand
Strand 2
A
1385 1386anti-parallel
Back to list of sheets
Back to top of page

There are 5 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
1032 1033first strand
Strand 2
A
988 992anti-parallel
Strand 3
A
945 947anti-parallel
Strand 4
A
930 934anti-parallel
Strand 5
A
1038 1044anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
1871 1872first strand
Strand 2
A
1878 1879anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
1881 1883first strand
Strand 2
A
1889 1891anti-parallel
Back to list of sheets
Back to top of page

Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il