Analysis of interatomic Contacts of Structural Units in PDB entry:
7XW5

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 7XW5 entry

There are 7 chains in PDB entry 7XW5 (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	GLU 10	LEU 384
B	GLU 3	ASN 340
G	THR 6	ARG 62
N	GLN 1	SER 128
R	GLU 30	GLY 697
X	ASP 6	SER 92
Y	PHE 21	CYS 125

There are 35 helices in PDB entry 7XW5. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	10	38	Right-handed alpha
Helix 2	AA2	A	49	51	Right-handed 310
Helix 3	AA3	A	52	61	Right-handed alpha
Helix 4	AA4	A	62	64	Right-handed 310
Helix 5	AA5	A	233	239	Right-handed 310
Helix 6	AA6	A	255	269	Right-handed alpha
Helix 7	AA7	A	283	293	Right-handed alpha
Helix 8	AA8	A	297	302	Right-handed alpha
Helix 9	AA9	A	303	307	Right-handed 310
Helix 10	AB1	A	321	341	Right-handed alpha
Helix 11	AB2	A	360	381	Right-handed alpha
Helix 12	AB3	B	4	26	Right-handed alpha
Helix 13	AB4	B	29	34	Right-handed alpha
Helix 14	AB5	B	35	37	Right-handed 310
Helix 15	AB6	G	7	24	Right-handed alpha
Helix 16	AB7	G	29	44	Right-handed alpha
Helix 17	AB8	G	45	48	Right-handed 310
Helix 18	AB9	N	28	32	Right-handed 310
Helix 19	AC1	N	87	91	Right-handed 310
Helix 20	AC2	R	265	270	Right-handed 310
Helix 21	AC3	R	279	286	Right-handed 310
Helix 22	AC4	R	383	389	Right-handed alpha
Helix 23	AC5	R	414	442	Right-handed alpha
Helix 24	AC6	R	447	478	Right-handed alpha
Helix 25	AC7	R	480	483	Right-handed 310
Helix 26	AC8	R	484	491	Right-handed alpha
Helix 27	AC9	R	491	525	Right-handed alpha
Helix 28	AD1	R	528	532	Right-handed 310
Helix 29	AD2	R	534	559	Right-handed alpha
Helix 30	AD3	R	576	609	Right-handed alpha
Helix 31	AD4	R	618	649	Right-handed alpha
Helix 32	AD5	R	655	666	Right-handed alpha
Helix 33	AD6	R	668	679	Right-handed alpha
Helix 34	AD7	R	682	695	Right-handed alpha
Helix 35	AD8	X	40	45	Right-handed alpha

There are 20 sheets in PDB entry 7XW5. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	208	214	first strand
Strand 2	A	217	223	anti-parallel
Strand 3	A	41	47	parallel
Strand 4	A	243	249	parallel
Strand 5	A	276	282	parallel
Strand 6	A	349	353	parallel

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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	46	51	first strand
Strand 2	B	336	340	anti-parallel
Strand 3	B	327	331	anti-parallel
Strand 4	B	315	320	anti-parallel

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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	58	63	first strand
Strand 2	B	69	74	anti-parallel
Strand 3	B	78	83	anti-parallel
Strand 4	B	89	94	anti-parallel

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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	100	105	first strand
Strand 2	B	111	116	anti-parallel
Strand 3	B	120	125	anti-parallel
Strand 4	B	134	140	anti-parallel

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There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	146	151	first strand
Strand 2	B	156	161	anti-parallel
Strand 3	B	166	170	anti-parallel
Strand 4	B	175	180	anti-parallel

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There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	187	192	first strand
Strand 2	B	198	203	anti-parallel
Strand 3	B	208	212	anti-parallel
Strand 4	B	218	222	anti-parallel

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There are 4 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	229	234	first strand
Strand 2	B	240	245	anti-parallel
Strand 3	B	250	254	anti-parallel
Strand 4	B	259	264	anti-parallel

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There are 4 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	273	278	first strand
Strand 2	B	284	289	anti-parallel
Strand 3	B	294	298	anti-parallel
Strand 4	B	306	308	anti-parallel

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There are 4 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	N	3	8	first strand
Strand 2	N	17	25	anti-parallel
Strand 3	N	78	84	anti-parallel
Strand 4	N	68	73	anti-parallel

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There are 6 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	N	10	12	first strand
Strand 2	N	122	126	parallel
Strand 3	N	92	98	anti-parallel
Strand 4	N	34	39	anti-parallel
Strand 5	N	46	51	anti-parallel
Strand 6	N	58	60	anti-parallel

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There are 13 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	R	33	35	first strand
Strand 2	R	38	42	anti-parallel
Strand 3	R	56	60	parallel
Strand 4	R	80	85	parallel
Strand 5	R	105	109	parallel
Strand 6	R	130	134	parallel
Strand 7	R	154	159	parallel
Strand 8	R	180	183	parallel
Strand 9	R	202	206	parallel
Strand 10	R	230	232	parallel
Strand 11	R	251	253	parallel
Strand 12	R	274	276	parallel
Strand 13	R	397	399	parallel

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There are 3 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	R	66	67	first strand
Strand 2	R	91	92	parallel
Strand 3	R	116	117	parallel

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There are 2 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	R	97	98	first strand
Strand 2	R	122	123	parallel

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There are 3 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	R	166	167	first strand
Strand 2	R	191	192	parallel
Strand 3	R	215	216	parallel

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There are 3 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	X	11	14	first strand
Strand 2	X	26	31	anti-parallel
Strand 3	Y	52	55	anti-parallel

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There are 2 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	X	53	55	first strand
Strand 2	Y	113	115	parallel

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There are 2 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	X	59	70	first strand
Strand 2	X	74	85	anti-parallel

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There are 2 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	X	91	92	first strand
Strand 2	Y	108	109	parallel

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There are 2 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	Y	23	31	first strand
Strand 2	Y	40	48	anti-parallel

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There are 2 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	Y	71	83	first strand
Strand 2	Y	94	106	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 7XW5

Analysis of interatomic Contacts of Structural Units in PDB entry:
7XW5