Analysis of interatomic Contacts of Structural Units in PDB entry:
7XX4


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7XX4 entry

There are 2 chains in PDB entry 7XX4 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 THR 5ALA 399
B
 ALA 7ALA 399
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 42 helices in PDB entry 7XX4. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
16 21Right-handed alpha
Helix 2
AA2
A
23 33Right-handed alpha
Helix 3
AA3
A
42 44Right-handed 310
Helix 4
AA4
A
45 51Right-handed alpha
Helix 5
AA5
A
76 99Right-handed alpha
Helix 6
AA6
A
113 124Right-handed alpha
Helix 7
AA7
A
139 144Right-handed alpha
Helix 8
AA8
A
144 149Right-handed alpha
Helix 9
AA9
A
155 172Right-handed alpha
Helix 10
AB1
A
177 184Right-handed alpha
Helix 11
AB2
A
193 197Right-handed 310
Helix 12
AB3
A
199 203Right-handed 310
Helix 13
AB4
A
218 222Right-handed 310
Helix 14
AB5
A
245 257Right-handed alpha
Helix 15
AB6
A
273 278Right-handed 310
Helix 16
AB7
A
291 297Right-handed alpha
Helix 17
AB8
A
307 317Right-handed alpha
Helix 18
AB9
A
329 340Right-handed alpha
Helix 19
AC1
A
352 366Right-handed alpha
Helix 20
AC2
A
366 383Right-handed alpha
Helix 21
AC3
A
385 396Right-handed alpha
Helix 22
AC4
B
16 21Right-handed alpha
Helix 23
AC5
B
23 33Right-handed alpha
Helix 24
AC6
B
42 44Right-handed 310
Helix 25
AC7
B
45 51Right-handed alpha
Helix 26
AC8
B
77 99Right-handed alpha
Helix 27
AC9
B
113 124Right-handed alpha
Helix 28
AD1
B
139 144Right-handed alpha
Helix 29
AD2
B
144 149Right-handed alpha
Helix 30
AD3
B
155 172Right-handed alpha
Helix 31
AD4
B
177 184Right-handed alpha
Helix 32
AD5
B
193 197Right-handed 310
Helix 33
AD6
B
199 203Right-handed 310
Helix 34
AD7
B
218 222Right-handed 310
Helix 35
AD8
B
245 257Right-handed alpha
Helix 36
AD9
B
273 278Right-handed 310
Helix 37
AE1
B
291 299Right-handed alpha
Helix 38
AE2
B
307 318Right-handed alpha
Helix 39
AE3
B
329 340Right-handed alpha
Helix 40
AE4
B
352 366Right-handed alpha
Helix 41
AE5
B
366 383Right-handed alpha
Helix 42
AE6
B
386 396Right-handed alpha
Back to top of page

There are 4 sheets in PDB entry 7XX4. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 7 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
55 58first strand
Strand 2
A
36 41parallel
Strand 3
A
8 12parallel
Strand 4
A
106 110parallel
Strand 5
A
127 131parallel
Strand 6
A
188 190parallel
Strand 7
A
208 210parallel
Back to list of sheets
Back to top of page

There are 6 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
284 287first strand
Strand 2
A
262 267parallel
Strand 3
A
232 237parallel
Strand 4
A
301 304parallel
Strand 5
A
321 323parallel
Strand 6
A
343 345parallel
Back to list of sheets
Back to top of page

There are 7 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
55 58first strand
Strand 2
B
36 41parallel
Strand 3
B
8 12parallel
Strand 4
B
106 110parallel
Strand 5
B
127 131parallel
Strand 6
B
188 190parallel
Strand 7
B
208 210parallel
Back to list of sheets
Back to top of page

There are 6 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
284 287first strand
Strand 2
B
262 267parallel
Strand 3
B
232 237parallel
Strand 4
B
301 304parallel
Strand 5
B
321 323parallel
Strand 6
B
343 345parallel
Back to list of sheets
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il