Analysis of interatomic Contacts of Structural Units in PDB entry:
7XXE


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7XXE entry

There are 2 chains in PDB entry 7XXE (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
B
 LYS 626ALA 903
A
 THR 627ALA 903
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 18 helices in PDB entry 7XXE. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
B
636 646Right-handed alpha
Helix 2
AA2
B
679 689Right-handed alpha
Helix 3
AA3
B
691 695Right-handed 310
Helix 4
AA4
B
702 710Right-handed alpha
Helix 5
AA5
B
723 731Right-handed alpha
Helix 6
AA6
B
737 742Right-handed alpha
Helix 7
AA7
B
760 770Right-handed alpha
Helix 8
AA8
B
771 774Right-handed 310
Helix 9
AA9
B
786 795Right-handed alpha
Helix 10
AB1
B
889 895Right-handed alpha
Helix 11
AB2
A
636 645Right-handed alpha
Helix 12
AB3
A
678 691Right-handed alpha
Helix 13
AB4
A
700 710Right-handed alpha
Helix 14
AB5
A
721 731Right-handed alpha
Helix 15
AB6
A
735 743Right-handed alpha
Helix 16
AB7
A
762 772Right-handed alpha
Helix 17
AB8
A
786 793Right-handed alpha
Helix 18
AB9
A
891 895Right-handed 310
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There are 4 sheets in PDB entry 7XXE. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
627 629first strand
Strand 2
B
880 883parallel
Strand 3
B
850 853parallel
Strand 4
B
780 783parallel
Strand 5
B
832 833parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
631 633first strand
Strand 2
A
884 886parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
781 782first strand
Strand 2
A
832 833parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
850 851first strand
Strand 2
A
880 881parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il