Analysis of interatomic Contacts of Structural Units in PDB entry:
7XYQ


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7XYQ entry

There are 2 chains in PDB entry 7XYQ (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 PHE 19VAL 225
B
 GLY -4LEU 119
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 10 helices in PDB entry 7XYQ. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
49 52Right-handed 310
Helix 2
AA2
A
78 82Right-handed 310
Helix 3
AA3
A
89 94Right-handed 310
Helix 4
AA4
B
2 22Right-handed alpha
Helix 5
AA5
B
24 34Right-handed alpha
Helix 6
AA6
B
40 54Right-handed alpha
Helix 7
AA7
B
64 73Right-handed alpha
Helix 8
AA8
B
77 90Right-handed alpha
Helix 9
AA9
B
95 109Right-handed alpha
Helix 10
AB1
B
112 119Right-handed 310
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There are 4 sheets in PDB entry 7XYQ. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
27 29first strand
Strand 2
A
121 129parallel
Strand 3
A
110 117anti-parallel
Strand 4
A
54 58anti-parallel
Strand 5
A
63 68anti-parallel
Strand 6
A
71 72anti-parallel
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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
36 41first strand
Strand 2
A
96 101anti-parallel
Strand 3
A
85 87anti-parallel
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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
138 145first strand
Strand 2
A
150 159anti-parallel
Strand 3
A
191 200anti-parallel
Strand 4
A
178 182anti-parallel
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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
174 175first strand
Strand 2
A
164 169anti-parallel
Strand 3
A
207 212anti-parallel
Strand 4
A
220 224anti-parallel
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