Analysis of interatomic Contacts of Structural Units in PDB entry:
7XYY


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7XYY entry

There are 2 chains in PDB entry 7XYY (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 HIS 85VAL 470
B
 HIS 85VAL 470
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 15 helices in PDB entry 7XYY. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
105 111Right-handed alpha
Helix 2
AA2
A
121 231Right-handed alpha
Helix 3
AA3
A
233 240Right-handed alpha
Helix 4
AA4
A
241 254Right-handed alpha
Helix 5
AA5
A
270 284Right-handed alpha
Helix 6
AA6
A
295 298Right-handed 310
Helix 7
AA7
A
375 378Right-handed 310
Helix 8
AA8
B
105 111Right-handed alpha
Helix 9
AA9
B
122 224Right-handed alpha
Helix 10
AB1
B
225 231Right-handed alpha
Helix 11
AB2
B
233 240Right-handed alpha
Helix 12
AB3
B
241 254Right-handed alpha
Helix 13
AB4
B
271 284Right-handed alpha
Helix 14
AB5
B
294 298Right-handed 310
Helix 15
AB6
B
375 379Right-handed 310
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There are 9 sheets in PDB entry 7XYY. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
95 96first strand
Strand 2
A
103 104anti-parallel
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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
293 294first strand
Strand 2
A
334 336anti-parallel
Strand 3
A
452 453anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
302 305first strand
Strand 2
A
310 313anti-parallel
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There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
345 350first strand
Strand 2
A
412 417anti-parallel
Strand 3
A
424 428anti-parallel
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There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
356 362first strand
Strand 2
A
380 386anti-parallel
Strand 3
A
390 394anti-parallel
Strand 4
A
400 402anti-parallel
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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
95 97first strand
Strand 2
B
102 104anti-parallel
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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
302 305first strand
Strand 2
B
310 313anti-parallel
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There are 3 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
345 350first strand
Strand 2
B
412 418anti-parallel
Strand 3
B
423 428anti-parallel
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There are 4 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
357 361first strand
Strand 2
B
381 386anti-parallel
Strand 3
B
390 393anti-parallel
Strand 4
B
401 402anti-parallel
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