Analysis of interatomic Contacts of Structural Units in PDB entry:
7XZJ

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 7XZJ entry

There are 8 chains in PDB entry 7XZJ (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
3	ALA 260	PRO 291
4	PRO 13	ARG 335
7	ASP 149	PHE 798
9	ARG 529	ALA 927
A	SER 596	ASN 1990
E	THR 414	GLU 560
G	HIS 324	ASP 396
X	ALA 2	ALA 25

There are 50 helices in PDB entry 7XZJ. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	3	260	286	Right-handed alpha
Helix 2	AA2	4	14	18	Right-handed alpha
Helix 3	AA3	4	20	31	Right-handed alpha
Helix 4	AA4	4	222	237	Right-handed alpha
Helix 5	AA5	4	237	242	Right-handed alpha
Helix 6	AA6	4	243	248	Right-handed alpha
Helix 7	AA7	4	251	260	Right-handed alpha
Helix 8	AA8	7	179	187	Right-handed alpha
Helix 9	AA9	7	196	211	Right-handed alpha
Helix 10	AB1	7	258	270	Right-handed alpha
Helix 11	AB2	7	279	297	Right-handed alpha
Helix 12	AB3	7	350	362	Right-handed alpha
Helix 13	AB4	7	370	383	Right-handed alpha
Helix 14	AB5	7	685	689	Right-handed 310
Helix 15	AB6	7	751	756	Right-handed alpha
Helix 16	AB7	9	532	541	Right-handed alpha
Helix 17	AB8	9	566	586	Right-handed alpha
Helix 18	AB9	9	588	625	Right-handed alpha
Helix 19	AC1	9	646	651	Right-handed 310
Helix 20	AC2	9	904	910	Right-handed alpha
Helix 21	AC3	9	911	927	Right-handed alpha
Helix 22	AC4	A	602	611	Right-handed alpha
Helix 23	AC5	A	616	633	Right-handed alpha
Helix 24	AC6	A	641	648	Right-handed alpha
Helix 25	AC7	A	652	667	Right-handed alpha
Helix 26	AC8	A	1046	1063	Right-handed alpha
Helix 27	AC9	A	1065	1077	Right-handed alpha
Helix 28	AD1	A	1077	1088	Right-handed alpha
Helix 29	AD2	A	1231	1244	Right-handed alpha
Helix 30	AD3	A	1244	1250	Right-handed alpha
Helix 31	AD4	A	1252	1256	Right-handed 310
Helix 32	AD5	A	1272	1277	Right-handed 310
Helix 33	AD6	A	1397	1412	Right-handed alpha
Helix 34	AD7	A	1430	1437	Right-handed alpha
Helix 35	AD8	A	1438	1449	Right-handed alpha
Helix 36	AD9	A	1455	1481	Right-handed alpha
Helix 37	AE1	A	1481	1494	Right-handed alpha
Helix 38	AE2	A	1690	1694	Right-handed 310
Helix 39	AE3	A	1698	1719	Right-handed alpha
Helix 40	AE4	A	1720	1726	Right-handed alpha
Helix 41	AE5	A	1955	1971	Right-handed alpha
Helix 42	AE6	A	1973	1975	Right-handed 310
Helix 43	AE7	A	1976	1990	Right-handed alpha
Helix 44	AE8	E	543	560	Right-handed alpha
Helix 45	AE9	G	325	345	Right-handed alpha
Helix 46	AF1	G	345	373	Right-handed alpha
Helix 47	AF2	G	374	376	Right-handed 310
Helix 48	AF3	G	383	391	Right-handed alpha
Helix 49	AF4	X	3	15	Right-handed alpha
Helix 50	AF5	X	15	21	Right-handed alpha

There are 12 sheets in PDB entry 7XZJ. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	4	137	145	first strand
Strand 2	4	148	157	anti-parallel
Strand 3	4	162	170	anti-parallel

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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	4	187	189	first strand
Strand 2	4	180	182	anti-parallel
Strand 3	A	600	601	parallel

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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	4	204	206	first strand
Strand 2	4	213	215	anti-parallel

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There are 5 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	4	275	280	first strand
Strand 2	4	291	297	anti-parallel
Strand 3	4	306	312	anti-parallel
Strand 4	4	317	323	anti-parallel
Strand 5	4	331	332	anti-parallel

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There are 3 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	7	163	169	first strand
Strand 2	7	232	240	parallel
Strand 3	7	215	224	anti-parallel

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There are 3 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	7	248	249	first strand
Strand 2	7	313	319	parallel
Strand 3	7	302	307	anti-parallel

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There are 4 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	7	343	345	first strand
Strand 2	7	322	333	anti-parallel
Strand 3	7	403	412	parallel
Strand 4	7	387	396	anti-parallel

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There are 15 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	7	418	426	first strand
Strand 2	9	891	900	anti-parallel
Strand 3	9	877	886	anti-parallel
Strand 4	9	861	874	anti-parallel
Strand 5	9	843	852	anti-parallel
Strand 6	9	826	836	anti-parallel
Strand 7	9	806	817	anti-parallel
Strand 8	9	791	803	anti-parallel
Strand 9	9	772	781	anti-parallel
Strand 10	9	751	761	anti-parallel
Strand 11	9	733	744	anti-parallel
Strand 12	9	712	725	anti-parallel
Strand 13	9	699	707	anti-parallel
Strand 14	9	677	686	anti-parallel
Strand 15	9	661	666	anti-parallel

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There are 15 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	7	446	450	first strand
Strand 2	7	459	466	anti-parallel
Strand 3	7	476	484	anti-parallel
Strand 4	7	491	503	anti-parallel
Strand 5	7	519	533	anti-parallel
Strand 6	7	537	551	anti-parallel
Strand 7	7	583	601	anti-parallel
Strand 8	7	604	616	anti-parallel
Strand 9	7	637	649	anti-parallel
Strand 10	7	670	682	anti-parallel
Strand 11	7	712	722	anti-parallel
Strand 12	7	731	740	anti-parallel
Strand 13	7	762	770	anti-parallel
Strand 14	7	775	782	anti-parallel
Strand 15	7	788	794	anti-parallel

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There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	7	691	692	first strand
Strand 2	7	707	708	anti-parallel

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There are 2 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	1280	1283	first strand
Strand 2	A	1349	1352	anti-parallel

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There are 3 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	1375	1376	first strand
Strand 2	A	1383	1384	anti-parallel
Strand 3	A	1388	1389	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 7XZJ

Analysis of interatomic Contacts of Structural Units in PDB entry:
7XZJ