Analysis of interatomic Contacts of Structural Units in PDB entry:
7XZP

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 7XZP entry

There are 2 chains in PDB entry 7XZP (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	GLU 2	PHE 558
B	MET 0	PHE 558

There are 55 helices in PDB entry 7XZP. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	5	12	Right-handed alpha
Helix 2	AA2	A	17	24	Right-handed alpha
Helix 3	AA3	A	28	30	Right-handed 310
Helix 4	AA4	A	44	50	Right-handed 310
Helix 5	AA5	A	71	86	Right-handed alpha
Helix 6	AA6	A	101	106	Right-handed alpha
Helix 7	AA7	A	119	125	Right-handed alpha
Helix 8	AA8	A	129	152	Right-handed alpha
Helix 9	AA9	A	158	162	Right-handed 310
Helix 10	AB1	A	172	176	Right-handed 310
Helix 11	AB2	A	184	188	Right-handed 310
Helix 12	AB3	A	201	209	Right-handed alpha
Helix 13	AB4	A	212	223	Right-handed alpha
Helix 14	AB5	A	241	249	Right-handed alpha
Helix 15	AB6	A	282	293	Right-handed alpha
Helix 16	AB7	A	306	314	Right-handed alpha
Helix 17	AB8	A	314	320	Right-handed alpha
Helix 18	AB9	A	331	339	Right-handed alpha
Helix 19	AC1	A	342	346	Right-handed 310
Helix 20	AC2	A	350	371	Right-handed alpha
Helix 21	AC3	A	387	400	Right-handed alpha
Helix 22	AC4	A	409	414	Right-handed alpha
Helix 23	AC5	A	415	417	Right-handed 310
Helix 24	AC6	A	418	432	Right-handed alpha
Helix 25	AC7	A	445	457	Right-handed alpha
Helix 26	AC8	A	466	479	Right-handed alpha
Helix 27	AC9	A	541	545	Right-handed 310
Helix 28	AD1	B	5	12	Right-handed alpha
Helix 29	AD2	B	17	24	Right-handed alpha
Helix 30	AD3	B	28	30	Right-handed 310
Helix 31	AD4	B	44	50	Right-handed 310
Helix 32	AD5	B	71	86	Right-handed alpha
Helix 33	AD6	B	101	106	Right-handed alpha
Helix 34	AD7	B	119	125	Right-handed alpha
Helix 35	AD8	B	129	152	Right-handed alpha
Helix 36	AD9	B	158	162	Right-handed 310
Helix 37	AE1	B	172	176	Right-handed 310
Helix 38	AE2	B	184	188	Right-handed 310
Helix 39	AE3	B	201	209	Right-handed alpha
Helix 40	AE4	B	212	222	Right-handed alpha
Helix 41	AE5	B	237	240	Right-handed 310
Helix 42	AE6	B	241	249	Right-handed alpha
Helix 43	AE7	B	282	293	Right-handed alpha
Helix 44	AE8	B	306	314	Right-handed alpha
Helix 45	AE9	B	314	320	Right-handed alpha
Helix 46	AF1	B	331	339	Right-handed alpha
Helix 47	AF2	B	342	346	Right-handed 310
Helix 48	AF3	B	350	371	Right-handed alpha
Helix 49	AF4	B	387	400	Right-handed alpha
Helix 50	AF5	B	409	414	Right-handed alpha
Helix 51	AF6	B	415	417	Right-handed 310
Helix 52	AF7	B	418	431	Right-handed alpha
Helix 53	AF8	B	445	457	Right-handed alpha
Helix 54	AF9	B	466	479	Right-handed alpha
Helix 55	AG1	B	541	546	Right-handed 310

There are 16 sheets in PDB entry 7XZP. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	32	35	first strand
Strand 2	A	39	42	anti-parallel
Strand 3	A	256	260	anti-parallel
Strand 4	A	115	118	anti-parallel
Strand 5	A	111	112	anti-parallel

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There are 10 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	32	35	first strand
Strand 2	A	39	42	anti-parallel
Strand 3	A	256	260	anti-parallel
Strand 4	A	265	268	anti-parallel
Strand 5	A	90	94	parallel
Strand 6	A	295	299	parallel
Strand 7	A	56	62	parallel
Strand 8	A	325	330	parallel
Strand 9	A	376	381	parallel
Strand 10	A	405	408	parallel

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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	166	168	first strand
Strand 2	A	195	197	parallel

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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	178	180	first strand
Strand 2	A	191	193	anti-parallel

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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	224	227	first strand
Strand 2	A	233	235	anti-parallel

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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	463	465	first strand
Strand 2	A	510	512	parallel

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There are 3 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	486	489	first strand
Strand 2	A	523	527	parallel
Strand 3	A	514	518	anti-parallel

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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	547	548	first strand
Strand 2	A	554	555	anti-parallel

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There are 4 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	32	35	first strand
Strand 2	B	39	42	anti-parallel
Strand 3	B	256	260	anti-parallel
Strand 4	B	117	118	anti-parallel

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There are 10 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	32	35	first strand
Strand 2	B	39	42	anti-parallel
Strand 3	B	256	260	anti-parallel
Strand 4	B	265	268	anti-parallel
Strand 5	B	90	94	parallel
Strand 6	B	295	299	parallel
Strand 7	B	56	62	parallel
Strand 8	B	325	330	parallel
Strand 9	B	376	381	parallel
Strand 10	B	405	408	parallel

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There are 2 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	166	168	first strand
Strand 2	B	195	197	parallel

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There are 2 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	178	180	first strand
Strand 2	B	191	193	anti-parallel

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There are 2 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	224	227	first strand
Strand 2	B	233	235	anti-parallel

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There are 2 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	462	465	first strand
Strand 2	B	509	512	parallel

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There are 3 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	486	489	first strand
Strand 2	B	523	527	parallel
Strand 3	B	514	518	anti-parallel

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There are 2 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	547	548	first strand
Strand 2	B	554	555	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 7XZP

Analysis of interatomic Contacts of Structural Units in PDB entry:
7XZP