Analysis of interatomic Contacts of Structural Units in PDB entry:
7XZQ


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7XZQ entry


Note, this PDB entry contains modified residue(s) PHOSPHOTHREONINE (TPO) . This residue is treated as heterogroup (ligand) both in the PDB entry and in LPC/CSU analysis.

There are 5 chains in PDB entry 7XZQ (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASP 11ARG 180
A
 VAL 182ASN 186
A
 PHE 188LYS 310
B
 TRP 2LYS 10
B
 GLY 13GLY 13
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 16 helices in PDB entry 7XZQ. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
14 18Right-handed 310
Helix 2
AA2
A
59 61Right-handed 310
Helix 3
AA3
A
62 77Right-handed alpha
Helix 4
AA4
A
113 119Right-handed alpha
Helix 5
AA5
A
120 124Right-handed 310
Helix 6
AA6
A
126 147Right-handed alpha
Helix 7
AA7
A
155 157Right-handed 310
Helix 8
AA8
A
191 195Right-handed 310
Helix 9
AA9
A
196 201Right-handed alpha
Helix 10
AB1
A
212 229Right-handed alpha
Helix 11
AB2
A
237 245Right-handed alpha
Helix 12
AB3
A
259 270Right-handed alpha
Helix 13
AB4
A
273 277Right-handed 310
Helix 14
AB5
A
279 285Right-handed alpha
Helix 15
AB6
A
286 291Right-handed alpha
Helix 16
AB7
A
294 309Right-handed alpha
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There are 3 sheets in PDB entry 7XZQ. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
25 34first strand
Strand 2
A
37 44anti-parallel
Strand 3
A
50 57anti-parallel
Strand 4
A
100 106anti-parallel
Strand 5
A
85 91anti-parallel
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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
111 112first strand
Strand 2
A
159 161anti-parallel
Strand 3
A
167 169anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
149 150first strand
Strand 2
A
176 177anti-parallel
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