Analysis of interatomic Contacts of Structural Units in PDB entry:
7XZR


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7XZR entry


Note, this PDB entry contains modified residue(s) PHOSPHOTHREONINE (TPO) . This residue is treated as heterogroup (ligand) both in the PDB entry and in LPC/CSU analysis.

There are 8 chains in PDB entry 7XZR (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLU 12ARG 180
A
 VAL 182ASN 186
A
 PHE 188LYS 310
B
 GLU 12ARG 180
B
 VAL 182ASN 186
B
 PHE 188LYS 312
C
 TRP 2THR 12
D
 TRP 2THR 12
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 31 helices in PDB entry 7XZR. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
14 18Right-handed 310
Helix 2
AA2
A
62 77Right-handed alpha
Helix 3
AA3
A
112 120Right-handed alpha
Helix 4
AA4
A
121 124Right-handed 310
Helix 5
AA5
A
126 147Right-handed alpha
Helix 6
AA6
A
155 157Right-handed 310
Helix 7
AA7
A
191 195Right-handed 310
Helix 8
AA8
A
196 201Right-handed alpha
Helix 9
AA9
A
212 229Right-handed alpha
Helix 10
AB1
A
237 245Right-handed alpha
Helix 11
AB2
A
259 270Right-handed alpha
Helix 12
AB3
A
279 285Right-handed alpha
Helix 13
AB4
A
286 291Right-handed alpha
Helix 14
AB5
A
294 309Right-handed alpha
Helix 15
AB6
B
59 61Right-handed 310
Helix 16
AB7
B
62 77Right-handed alpha
Helix 17
AB8
B
113 120Right-handed alpha
Helix 18
AB9
B
121 124Right-handed 310
Helix 19
AC1
B
126 147Right-handed alpha
Helix 20
AC2
B
155 157Right-handed 310
Helix 21
AC3
B
191 195Right-handed 310
Helix 22
AC4
B
196 205Right-handed alpha
Helix 23
AC5
B
213 229Right-handed alpha
Helix 24
AC6
B
237 245Right-handed alpha
Helix 25
AC7
B
259 270Right-handed alpha
Helix 26
AC8
B
273 277Right-handed 310
Helix 27
AC9
B
279 285Right-handed alpha
Helix 28
AD1
B
286 291Right-handed alpha
Helix 29
AD2
B
294 312Right-handed alpha
Helix 30
AD3
C
6 8Right-handed 310
Helix 31
AD4
D
6 8Right-handed 310
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There are 8 sheets in PDB entry 7XZR. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
25 33first strand
Strand 2
A
38 44anti-parallel
Strand 3
A
50 57anti-parallel
Strand 4
A
100 105anti-parallel
Strand 5
A
85 91anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
149 150first strand
Strand 2
A
176 177anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
159 161first strand
Strand 2
A
167 169anti-parallel
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There are 5 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
25 34first strand
Strand 2
B
37 44anti-parallel
Strand 3
B
50 57anti-parallel
Strand 4
B
100 105anti-parallel
Strand 5
B
85 91anti-parallel
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There are 3 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
111 112first strand
Strand 2
B
159 161anti-parallel
Strand 3
B
167 169anti-parallel
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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
149 150first strand
Strand 2
B
176 177anti-parallel
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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
3 4first strand
Strand 2
C
10 11anti-parallel
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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
3 4first strand
Strand 2
D
10 11anti-parallel
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