Analysis of interatomic Contacts of Structural Units in PDB entry:
7Y10


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7Y10 entry

There are 2 chains in PDB entry 7Y10 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LEU 77GLU 367
B
 LEU 77SER 352
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 43 helices in PDB entry 7Y10. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
84 101Right-handed alpha
Helix 2
AA2
A
105 109Right-handed 310
Helix 3
AA3
A
110 121Right-handed alpha
Helix 4
AA4
A
124 143Right-handed alpha
Helix 5
AA5
A
146 151Right-handed alpha
Helix 6
AA6
A
155 163Right-handed alpha
Helix 7
AA7
A
183 185Right-handed 310
Helix 8
AA8
A
186 194Right-handed alpha
Helix 9
AA9
A
195 213Right-handed alpha
Helix 10
AB1
A
213 223Right-handed alpha
Helix 11
AB2
A
239 243Right-handed 310
Helix 12
AB3
A
244 262Right-handed alpha
Helix 13
AB4
A
275 277Right-handed 310
Helix 14
AB5
A
278 287Right-handed alpha
Helix 15
AB6
A
290 296Right-handed alpha
Helix 16
AB7
A
304 312Right-handed alpha
Helix 17
AB8
A
318 322Right-handed 310
Helix 18
AB9
A
327 331Right-handed 310
Helix 19
AC1
A
332 337Right-handed alpha
Helix 20
AC2
A
339 342Right-handed 310
Helix 21
AC3
A
343 352Right-handed alpha
Helix 22
AC4
A
357 367Right-handed alpha
Helix 23
AC5
B
84 101Right-handed alpha
Helix 24
AC6
B
105 109Right-handed 310
Helix 25
AC7
B
110 121Right-handed alpha
Helix 26
AC8
B
124 143Right-handed alpha
Helix 27
AC9
B
146 151Right-handed alpha
Helix 28
AD1
B
155 163Right-handed alpha
Helix 29
AD2
B
183 185Right-handed 310
Helix 30
AD3
B
186 194Right-handed alpha
Helix 31
AD4
B
195 213Right-handed alpha
Helix 32
AD5
B
213 223Right-handed alpha
Helix 33
AD6
B
239 243Right-handed 310
Helix 34
AD7
B
244 262Right-handed alpha
Helix 35
AD8
B
275 277Right-handed 310
Helix 36
AD9
B
278 287Right-handed alpha
Helix 37
AE1
B
290 296Right-handed alpha
Helix 38
AE2
B
304 312Right-handed alpha
Helix 39
AE3
B
313 317Right-handed 310
Helix 40
AE4
B
318 322Right-handed 310
Helix 41
AE5
B
327 331Right-handed 310
Helix 42
AE6
B
339 342Right-handed 310
Helix 43
AE7
B
343 352Right-handed alpha
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There are 2 sheets in PDB entry 7Y10. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
165 170first strand
Strand 2
A
176 181anti-parallel
Strand 3
A
229 234parallel
Strand 4
A
266 272parallel
Strand 5
A
297 299parallel
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There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
165 170first strand
Strand 2
B
176 181anti-parallel
Strand 3
B
229 234parallel
Strand 4
B
266 272parallel
Strand 5
B
297 301parallel
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