Analysis of interatomic Contacts of Structural Units in PDB entry:
7Y1N


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7Y1N entry

There is 1 chain in PDB entry 7Y1N (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLN 217MET 1545
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 46 helices in PDB entry 7Y1N. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
217 227Right-handed alpha
Helix 2
AA2
A
228 230Right-handed 310
Helix 3
AA3
A
231 237Right-handed alpha
Helix 4
AA4
A
256 275Right-handed alpha
Helix 5
AA5
A
284 312Right-handed alpha
Helix 6
AA6
A
312 325Right-handed alpha
Helix 7
AA7
A
342 347Right-handed alpha
Helix 8
AA8
A
347 394Right-handed alpha
Helix 9
AA9
A
405 462Right-handed alpha
Helix 10
AB1
A
462 498Right-handed alpha
Helix 11
AB2
A
498 506Right-handed alpha
Helix 12
AB3
A
507 559Right-handed alpha
Helix 13
AB4
A
564 607Right-handed alpha
Helix 14
AB5
A
707 715Right-handed alpha
Helix 15
AB6
A
761 768Right-handed alpha
Helix 16
AB7
A
773 784Right-handed alpha
Helix 17
AB8
A
786 793Right-handed alpha
Helix 18
AB9
A
809 824Right-handed alpha
Helix 19
AC1
A
839 850Right-handed alpha
Helix 20
AC2
A
853 858Right-handed alpha
Helix 21
AC3
A
868 875Right-handed 310
Helix 22
AC4
A
891 899Right-handed alpha
Helix 23
AC5
A
899 911Right-handed alpha
Helix 24
AC6
A
974 985Right-handed alpha
Helix 25
AC7
A
986 1017Right-handed alpha
Helix 26
AC8
A
1029 1075Right-handed alpha
Helix 27
AC9
A
1076 1083Right-handed alpha
Helix 28
AD1
A
1084 1094Right-handed alpha
Helix 29
AD2
A
1094 1102Right-handed alpha
Helix 30
AD3
A
1102 1128Right-handed alpha
Helix 31
AD4
A
1130 1176Right-handed alpha
Helix 32
AD5
A
1177 1185Right-handed alpha
Helix 33
AD6
A
1186 1236Right-handed alpha
Helix 34
AD7
A
1242 1283Right-handed alpha
Helix 35
AD8
A
1347 1355Right-handed alpha
Helix 36
AD9
A
1374 1376Right-handed 310
Helix 37
AE1
A
1377 1384Right-handed alpha
Helix 38
AE2
A
1399 1404Right-handed alpha
Helix 39
AE3
A
1410 1421Right-handed alpha
Helix 40
AE4
A
1423 1430Right-handed alpha
Helix 41
AE5
A
1439 1443Right-handed 310
Helix 42
AE6
A
1446 1461Right-handed alpha
Helix 43
AE7
A
1476 1491Right-handed alpha
Helix 44
AE8
A
1502 1507Right-handed 310
Helix 45
AE9
A
1525 1532Right-handed alpha
Helix 46
AF1
A
1535 1545Right-handed alpha
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There are 7 sheets in PDB entry 7Y1N. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
690 692first strand
Strand 2
A
666 670anti-parallel
Strand 3
A
725 727anti-parallel
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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
684 687first strand
Strand 2
A
673 676anti-parallel
Strand 3
A
719 722anti-parallel
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There are 6 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
748 751first strand
Strand 2
A
828 832parallel
Strand 3
A
861 865parallel
Strand 4
A
696 700parallel
Strand 5
A
877 882parallel
Strand 6
A
885 890anti-parallel
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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1331 1332first strand
Strand 2
A
1308 1311anti-parallel
Strand 3
A
1365 1368anti-parallel
Strand 4
A
1371 1372anti-parallel
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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1313 1315first strand
Strand 2
A
1325 1328anti-parallel
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There are 6 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1386 1388first strand
Strand 2
A
1465 1469parallel
Strand 3
A
1495 1499parallel
Strand 4
A
1337 1341parallel
Strand 5
A
1511 1515parallel
Strand 6
A
1520 1524anti-parallel
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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1397 1398first strand
Strand 2
A
1437 1438anti-parallel
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