Analysis of interatomic Contacts of Structural Units in PDB entry:
7Y1Q


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7Y1Q entry

There are 2 chains in PDB entry 7Y1Q (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLY 16ALA 442
B
 MET 210THR 242
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 22 helices in PDB entry 7Y1Q. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
17 34Right-handed alpha
Helix 2
AA2
A
35 52Right-handed alpha
Helix 3
AA3
A
57 72Right-handed alpha
Helix 4
AA4
A
73 84Right-handed alpha
Helix 5
AA5
A
84 89Right-handed alpha
Helix 6
AA6
A
90 105Right-handed alpha
Helix 7
AA7
A
108 116Right-handed alpha
Helix 8
AA8
A
116 138Right-handed alpha
Helix 9
AA9
A
142 151Right-handed alpha
Helix 10
AB1
A
152 172Right-handed alpha
Helix 11
AB2
A
176 195Right-handed alpha
Helix 12
AB3
A
254 268Right-handed alpha
Helix 13
AB4
A
269 270Right-handed 310
Helix 14
AB5
A
271 275Right-handed 310
Helix 15
AB6
A
276 285Right-handed alpha
Helix 16
AB7
A
287 315Right-handed alpha
Helix 17
AB8
A
321 339Right-handed alpha
Helix 18
AB9
A
345 375Right-handed alpha
Helix 19
AC1
A
376 378Right-handed 310
Helix 20
AC2
A
379 409Right-handed alpha
Helix 21
AC3
A
415 440Right-handed alpha
Helix 22
AC4
B
212 238Right-handed alpha
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There are no sheets in PDB entry 7Y1Q
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