Analysis of interatomic Contacts of Structural Units in PDB entry:
7Y47


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7Y47 entry

There is 1 chain in PDB entry 7Y47 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
B
 GLU 95HIS 875
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 45 helices in PDB entry 7Y47. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
B
100 116Right-handed alpha
Helix 2
AA2
B
125 133Right-handed alpha
Helix 3
AA3
B
146 157Right-handed alpha
Helix 4
AA4
B
170 188Right-handed alpha
Helix 5
AA5
B
191 206Right-handed alpha
Helix 6
AA6
B
207 209Right-handed 310
Helix 7
AA7
B
219 234Right-handed alpha
Helix 8
AA8
B
242 259Right-handed alpha
Helix 9
AA9
B
261 267Right-handed alpha
Helix 10
AB1
B
269 279Right-handed 310
Helix 11
AB2
B
284 289Right-handed alpha
Helix 12
AB3
B
290 292Right-handed 310
Helix 13
AB4
B
301 313Right-handed alpha
Helix 14
AB5
B
314 328Right-handed alpha
Helix 15
AB6
B
338 353Right-handed alpha
Helix 16
AB7
B
355 358Right-handed 310
Helix 17
AB8
B
359 372Right-handed alpha
Helix 18
AB9
B
389 403Right-handed alpha
Helix 19
AC1
B
408 414Right-handed 310
Helix 20
AC2
B
432 443Right-handed alpha
Helix 21
AC3
B
451 466Right-handed alpha
Helix 22
AC4
B
480 491Right-handed alpha
Helix 23
AC5
B
492 496Right-handed 310
Helix 24
AC6
B
497 509Right-handed alpha
Helix 25
AC7
B
528 545Right-handed alpha
Helix 26
AC8
B
545 560Right-handed alpha
Helix 27
AC9
B
561 565Right-handed 310
Helix 28
AD1
B
575 588Right-handed alpha
Helix 29
AD2
B
590 592Right-handed 310
Helix 30
AD3
B
593 615Right-handed alpha
Helix 31
AD4
B
622 633Right-handed alpha
Helix 32
AD5
B
634 641Right-handed 310
Helix 33
AD6
B
645 667Right-handed alpha
Helix 34
AD7
B
671 699Right-handed alpha
Helix 35
AD8
B
704 716Right-handed alpha
Helix 36
AD9
B
717 726Right-handed alpha
Helix 37
AE1
B
727 729Right-handed 310
Helix 38
AE2
B
734 741Right-handed alpha
Helix 39
AE3
B
744 762Right-handed alpha
Helix 40
AE4
B
762 768Right-handed alpha
Helix 41
AE5
B
774 781Right-handed alpha
Helix 42
AE6
B
787 812Right-handed alpha
Helix 43
AE7
B
819 838Right-handed alpha
Helix 44
AE8
B
838 845Right-handed alpha
Helix 45
AE9
B
852 869Right-handed alpha
Back to top of page

There are 2 sheets in PDB entry 7Y47. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
416 417first strand
Strand 2
B
421 422anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
515 516first strand
Strand 2
B
520 521anti-parallel
Back to list of sheets
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il