Analysis of interatomic Contacts of Structural Units in PDB entry:
7Y49


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7Y49 entry

There is 1 chain in PDB entry 7Y49 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLU 156GLY 724
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 24 helices in PDB entry 7Y49. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
156 164Right-handed alpha
Helix 2
AA2
A
168 184Right-handed alpha
Helix 3
AA3
A
187 200Right-handed alpha
Helix 4
AA4
A
211 257Right-handed alpha
Helix 5
AA5
A
261 266Right-handed alpha
Helix 6
AA6
A
267 285Right-handed alpha
Helix 7
AA7
A
289 311Right-handed alpha
Helix 8
AA8
A
311 360Right-handed alpha
Helix 9
AA9
A
360 367Right-handed alpha
Helix 10
AB1
A
370 417Right-handed alpha
Helix 11
AB2
A
427 466Right-handed alpha
Helix 12
AB3
A
467 471Right-handed 310
Helix 13
AB4
A
532 534Right-handed 310
Helix 14
AB5
A
535 541Right-handed alpha
Helix 15
AB6
A
562 569Right-handed alpha
Helix 16
AB7
A
583 588Right-handed alpha
Helix 17
AB8
A
589 591Right-handed 310
Helix 18
AB9
A
599 610Right-handed alpha
Helix 19
AC1
A
612 617Right-handed alpha
Helix 20
AC2
A
621 625Right-handed 310
Helix 21
AC3
A
635 647Right-handed alpha
Helix 22
AC4
A
668 674Right-handed alpha
Helix 23
AC5
A
691 697Right-handed alpha
Helix 24
AC6
A
714 720Right-handed alpha
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There are 3 sheets in PDB entry 7Y49. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
516 517first strand
Strand 2
A
492 494anti-parallel
Strand 3
A
551 553anti-parallel
Strand 4
A
556 557anti-parallel
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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
570 572first strand
Strand 2
A
654 656parallel
Strand 3
A
684 685parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
703 704first strand
Strand 2
A
709 711anti-parallel
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