Analysis of interatomic Contacts of Structural Units in PDB entry:
7Y5G


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7Y5G entry

There are 2 chains in PDB entry 7Y5G (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
B
 HIS 45GLU 371
A
 HIS 45GLU 371
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 30 helices in PDB entry 7Y5G. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
B
47 49Right-handed 310
Helix 2
AA2
B
50 86Right-handed alpha
Helix 3
AA3
B
87 92Right-handed alpha
Helix 4
AA4
B
100 118Right-handed alpha
Helix 5
AA5
B
132 138Right-handed alpha
Helix 6
AA6
B
138 162Right-handed alpha
Helix 7
AA7
B
168 191Right-handed alpha
Helix 8
AA8
B
223 246Right-handed alpha
Helix 9
AA9
B
251 260Right-handed alpha
Helix 10
AB1
B
263 268Right-handed alpha
Helix 11
AB2
B
270 275Right-handed alpha
Helix 12
AB3
B
288 298Right-handed alpha
Helix 13
AB4
B
331 345Right-handed alpha
Helix 14
AB5
B
360 362Right-handed 310
Helix 15
AB6
B
366 370Right-handed 310
Helix 16
AB7
A
47 49Right-handed 310
Helix 17
AB8
A
50 86Right-handed alpha
Helix 18
AB9
A
87 92Right-handed alpha
Helix 19
AC1
A
100 118Right-handed alpha
Helix 20
AC2
A
132 138Right-handed alpha
Helix 21
AC3
A
138 162Right-handed alpha
Helix 22
AC4
A
168 191Right-handed alpha
Helix 23
AC5
A
223 246Right-handed alpha
Helix 24
AC6
A
251 260Right-handed alpha
Helix 25
AC7
A
263 268Right-handed alpha
Helix 26
AC8
A
270 275Right-handed alpha
Helix 27
AC9
A
288 298Right-handed alpha
Helix 28
AD1
A
331 345Right-handed alpha
Helix 29
AD2
A
360 362Right-handed 310
Helix 30
AD3
A
366 370Right-handed 310
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There are 4 sheets in PDB entry 7Y5G. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
309 314first strand
Strand 2
B
317 322anti-parallel
Strand 3
B
351 354parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
325 326first strand
Strand 2
B
357 358parallel
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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
302 304first strand
Strand 2
A
325 326anti-parallel
Strand 3
A
357 358parallel
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There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
309 314first strand
Strand 2
A
317 322anti-parallel
Strand 3
A
351 354parallel
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